Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq271 98.7 9e-16 >seq271 Length=49288 Score = 98.7 bits (108), Expect = 9e-16 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || ||||| || |||| || ||| | || || |||||||||||| | || Sbjct 35778 CATGCAAATCTTCGTAAAGACATTGACGGGAAAGACGATCACCCTTGAAGTGGAAGCTTC 35837 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| ||||||| | || ||| |||||| ||||| ||||| || || ||||| ||||| Sbjct 35838 AGACACGATTGAAAATGTGAAAGCAAAAATACAAGATAAAGAGGGTATTCCACCAGATCA 35897 Query 27107 ACAGCGTTTAAT 27118 ||||| || || Sbjct 35898 GCAGCGCTTGAT 35909 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || | || |||||| | || ||||| ||||| || | || Sbjct 36595 ATGCAAATTTTTGTGAAGACGTTAACAGGCAAGACGATCACTCTAGAAGTTGAGGCTTCT 36654 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || || || ||||| ||||||||||| || ||||| ||||| Sbjct 36655 GACACGATTGAAAATGTAAAGGCCAAGATTCAGGACAAAGAAGGAATTCCACCAGATCAG 36714 Query 27108 CAGCGTTTAATATACGCCGGCAAACA 27133 |||||| | || | ||||| || || Sbjct 36715 CAGCGTCTTATTTTTGCCGGTAAGCA 36740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434874484114560