Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq271 102 2e-16 >seq271 Length=49288 Score = 102 bits (112), Expect = 2e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || || || ||||| || || || || || |||| |||||| |||||||| ||| Sbjct 36740 TGCTTACCGGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTGTCCTGAATC 36681 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || || || ||||| || |||||||| ||||| || |||||||||||||| || Sbjct 36680 TTGGCCTTTACATTTTCAATCGTGTCAGAAGCCTCAACTTCTAGAGTGATCGTCTTGCCT 36621 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 || | ||||| ||||| | ||||| Sbjct 36620 GTTAACGTCTTCACAAAAATTTGCAT 36595 Score = 91.5 bits (100), Expect = 3e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 210975 CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGT 211034 || ||||| ||||| ||||| |||||||| || | || || || ||||||||||| Sbjct 37065 CCCGCGAAAATAAGTCGTTGCTGGTCAGGTGGGATACCCTCTTTATCCTGGATCTTAGCC 37006 Query 211035 TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094 ||||| || ||||| || || || ||| ||||| || || || || || || || || Sbjct 37005 TTCACATTCTCGATCGTATCCGACGCTTCCACCTCCAGTGTTATAGTTTTGCCAGTAAGT 36946 Query 211095 GTCTTTACAAACACCTGCAT 211114 ||||| ||||| | |||||| Sbjct 36945 GTCTTAACAAAAATCTGCAT 36926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159032028492470