Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq349 102 1e-16 >seq349 Length=44324 Score = 102 bits (112), Expect = 1e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 77135 TCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTT 77194 ||||||||| || |||||||||| | ||| |||||||| ||||| | | ||||||||| Sbjct 28874 TCCAGACAAGACGTTACGAGTGTATACATTGCTGGTATAAGGTTCAATACTTTCATTGTT 28815 Query 77195 TCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAG 77254 ||| | ||||| || || |||||||| ||||| || || | || | ||||| | || Sbjct 28814 TCCAAGTATTTGTGCGGTTGAAGCAGTAGGCATTGGAGCTAATAACACGCTATTCCGGAT 28755 Query 77255 ACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAAC 77314 || || | ||| || || || | || ||||||||| |||||| || || Sbjct 28754 GCCGTGAACTGCGATCTTCTCACGTAAACTTTCCCAATCCCACTGATCTGTCGGCGTCAC 28695 Query 77315 ATCCCAAAGATCGTATTGTAGAAT 77338 |||||| | ||| |||| | ||| Sbjct 28694 ATCCCACATATCAAATTGCAAAAT 28671 Score = 89.7 bits (98), Expect = 7e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 77489 AAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATT 77548 ||| || || ||||| |||| || ||||| ||||| ||||| || | |||||||||||| Sbjct 28273 AAGGATGAAAGCATCAGCTAGGCCTTGAACACCAATGCCAATCGGACGATGTCTCTTATT 28214 Query 77549 GGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCT 77608 || | |||||||| | || ||||| ||| || |||| ||| || | |||||| Sbjct 28213 AGATCGCTCTGCTTCTGGTACTGGGTAATAGTTACGATCGATAACTTTGTTCAAATTTCT 28154 Query 77609 AACAACTACTTT 77620 ||| |||||||| Sbjct 28153 AACCACTACTTT 28142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694598655817920