Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaeophora_20elaphi_20[genbank_20GCA_5F000951195.1_202014-07-18] 8,078 sequences; 82,568,297 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq271 91.5 1e-13 seq1199 87.8 1e-12 >seq271 Length=49288 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || ||||| ||||| ||||||||||||| || | ||| || || || ||| || ||| Sbjct 35918 CCAGCAAAAATCAAGCGCTGCTGATCTGGTGGAATACCCTCTTTATCTTGTATTTT-TGC 35860 Query 44258 TT-CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 || || || | || ||||| | | |||||| || | || |||||||||||||| | Sbjct 35859 TTTCACATTTTCAATCGTGTCTGAAGCTTCCACTTCAAGGGTGATCGTCTTTCCCGTCAA 35800 Query 44317 GGTCTTCACGAAGATTTGCATG 44338 ||||| ||||||||||||||| Sbjct 35799 TGTCTTTACGAAGATTTGCATG 35778 >seq1199 Length=19938 Score = 87.8 bits (96), Expect = 1e-12 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || || || ||||||||||||||||||| ||| | || || || ||| ||||| ||| Sbjct 15171 CCTGCGAAAATCAAACGCTGCTGATCTGGAGGTATGCCCTCTTTGTCCTGAATCTT-TGC 15229 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 || | ||| | || || || | |||||| ||||| | |||||||||||| || || | Sbjct 15230 TTTCACATTCTCAATCGTATCCGAGGATTCGACCTCAAGCGTAATCGTCTTACCAGTCAA 15289 Query 44317 GGTCTTCACGAAGATTTGCATGATG 44341 || || || || |||||||| ||| Sbjct 15290 TGTTTTAACAAATATTTGCATAATG 15314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359954958720126