Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq7519 93.3 9e-14 seq1391 93.3 9e-14 seq1287 87.8 4e-12 >seq7519 Length=4603 Score = 93.3 bits (102), Expect = 9e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 165712 CCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCC 165771 |||||||||||||| |||||| | ||||||||||||||| ||||||||||||||| || Sbjct 2906 CCGTCTAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAGTCC 2847 Query 165772 CACGATGGGCA 165782 |||| |||||| Sbjct 2846 CACGGTGGGCA 2836 >seq1391 Length=26555 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTC-AGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||| ||| |||||||| ||||||||||||||| ||||||||||||||| Sbjct 18235 GCCCGTCTAGCTCCAGTTGGTAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAG 18176 Query 165769 CCCCACGATGGGC 165781 |||||| ||||| Sbjct 18175 TCCCACGGTGGGC 18163 >seq1287 Length=27661 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||||| ||||||||| |||| ||||||||| Sbjct 15060 TGCCCGGCTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 15119 Query 165769 CCCCACGATGGGC 165781 || | || |||| Sbjct 15120 CCTCGCGTCGGGC 15132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057555209566160