Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_001609.1 Length=11624 Score E Sequences producing significant alignments: (Bits) Value seq12234 2257 0.0 >seq12234 Length=1508 Score = 2257 bits (2502), Expect = 0.0 Identities = 1404/1518 (92%), Gaps = 11/1518 (1%) Strand=Plus/Minus Query 8270 GCGAAGCATACAGATACGGGGATGACGGTCTGCGCGACGGACAGCCGCAAACACAAAGAC 8329 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1508 GCGAAGCATGCAGATACGGGGATGACGGTCTGCGCGACGGACAGCCGCAAACACAAAGAC 1449 Query 8330 AAATTCAGGGTGTGAGGGGGTAAGGGTTGTAGCCATGATGGCAGCCTCCTGTGAATAGCA 8389 |||||||||||||||||||||||||||||||||||| | ||||||||||| || ||||| Sbjct 1448 AAATTCAGGGTGTGAGGGGGTAAGGGTTGTAGCCATAA-GGCAGCCTCCTTCGAGTAGCA 1390 Query 8390 AATAAC-GCTATCGCCGGAGTTCTCACGCTCGATGGCGATAGCCCAGACGGGGGTGAGAA 8448 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1389 AATAACTGCTATCGCCGGAGTTCTCACGCTCGATGGCGATAGCCCAGACGGGGGTGAGAA 1330 Query 8449 TACCGGCTTCACAGGATACCGGCCAGCCCGGAGGCTGCCCCGCCTGAGCTACCATTGACT 8508 ||||||| || || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1329 TACCGGCCTCGAAGAATACCGGCCAGCCCGGAGGCTGCCCCGCCTGAGCTACCATTGACT 1270 Query 8509 CTGCGGCATAATGAGCGGACGCGGGCAGGATGCACGGAATGCCATCTGCACGACTGACCA 8568 | | ||||||| ||| ||| |||||| || || |||||| | |||| Sbjct 1269 CAGTGGCATAACATGCGATTGCGAACAGGATC------ATACC---TGCACGGCAAACCA 1219 Query 8569 CACACCACACCATAATCTGGCGCTCTGTGGCATTGATTGCGACACaaaaaaaGACGCGTG 8628 ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct 1218 CACGCCACACCATAATCTGGCGCTCTGTGGCGTTGATTGCGACACAAAAAAAGACGCATG 1159 Query 8629 GCGCGTCATATGTCGCCTGTGAATTGCTCGGGTTCTCACGCCCGGCTGCCGATTTTGCGG 8688 |||||||||||||||||| || || | |||||||||||||||||||||||||||||||| Sbjct 1158 GCGCGTCATATGTCGCCTTCGAGTTACACGGGTTCTCACGCCCGGCTGCCGATTTTGCGG 1099 Query 8689 CAGGCGAAAAACTATATCCGCAAATGCCGGAAAAAGGCAAGCCAGAAAAAGGGAGTTTTT 8748 || |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1098 CAACGGAAAGACTATATCCGCAAATGCCGGAAAAAGGCAAGCCAGAAAAAGGGAGTTTTT 1039 Query 8749 GCAGAGCGGGCATCATCATGCGTCGTACCCCCGTTTGCGTCCGGCAANNNNNNNNNNNNN 8808 |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1038 GCAGAGCGGGCATCATCATGCGTCATACCCCCGTTTGCGTCCGGCAATGCGGCCGGCCAT 979 Query 8809 NNNNNNNGTGACTTCAGAGTGCAGCCAGGCCACATTTTTACCGCCAAGACTCACCTGCGG 8868 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 978 CCATGCGGTGACTTCAGAGTGCAGCCAGGCCACATTTTTACCGCCAAGACTCACCTGCGG 919 Query 8869 CGGAAATTCCCCCTTACGGATGAGTTCGTAGATGGTCGAGCGTGACAGGCCGCACAGGTG 8928 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 918 CGGAAATTCCCCCTTACGGATGAGTTCGTAGATGGTCGAGCGTGACAGGCCGCACAGGTG 859 Query 8929 CATCACTTCCGGCACACGTAAAAAACGCTCCTGCGTGATGTCCGGCAGCGGCATCAGTGG 8988 |||||||||||| | ||| |||||||||||||| |||||||||||| ||||||||||||| Sbjct 858 CATCACTTCCGGAAGACGCAAAAAACGCTCCTGTGTGATGTCCGGCTGCGGCATCAGTGG 799 Query 8989 CGTCACTGGGGCGGGAGACGGGGAAGAAAAAACAGCTTGCATCGGGCTACCTCGTTAATG 9048 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 798 CGTCACAGGGGCGGGAGACGGGGAAGAAAAAACAGCTTGCATCGGGCTACCTCGTTAATG 739 Query 9049 TCCATACAGCACCGGATAAGTCCGTCCGGCTTCGGGTAGCGCTTTATTTTGTGAATATTT 9108 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 738 TCCATACAGCACCGGATAAGTCTGTCCGGCTTCGGGTAGCGCTTTATTTTGTGAATATTT 679 Query 9109 TCAGCAGACGCAACAGGGGGGATTTGTTCAGGCTGTCTTACAATGGCTGTGTGTTTTTTG 9168 ||||||||||||||||||||||||||||| ||| | ||||||||| ||||||||||||| Sbjct 678 TCAGCAGACGCAACAGGGGGGATTTGTTCCGGCAGCCTTACAATGCTTGTGTGTTTTTTG 619 Query 9169 TTCATCTCCACTTAAAGTNNNNNNNNNNNNNNNNNNNNNNNNNGTAATTTTTATAGTGAA 9228 |||||||||||||||||| ||||||||||||||||| Sbjct 618 TTCATCTCCACTTAAAGTCATTTAAAGCCACTTAAAGCAATTCGTAATTTTTATAGTGAA 559 Query 9229 ATACAAATCGTTTCTTCTTATTCATTCCCGGCGAATTAATAAAAACAAACAGTAGTAAAC 9288 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 558 ATACAAATCGTTTTTTCTTATTCATTCCCGGCGAATTAATAAAAACAAACAGTAGTAAAC 499 Query 9289 AGCACAAAAAGCCCATCAACGGGTGAACAGTGGTGAACAGACGGTGAACAGTCATTACTG 9348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 498 AGCACAAAAAGCCCATCAACGGGTGAACAGTGGTGAACAGACGGTGAACAGTCATTACTG 439 Query 9349 CGATTGTTCACCCTTTAACTTACTGTATTACTTATCTTTTTTATTAAGGTGAACAGAGGT 9408 |||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||| Sbjct 438 CGATTGTTCACCCTTTAACTTACTGTATTACTTATCTTTTTTCTTATGGCGAACAGAGGT 379 Query 9409 GAACAGTAAAATATaaaaaaaCAAACAGTAAGCCGGTTTTTCCTGCGACCTTTTCCTGGC 9468 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 378 GAACAGTAAAATATAAAAAAACAAACAGTAAGACGGTTTTTCCTGCGACCTTTTCCTGGC 319 Query 9469 TTGCCGGTCTGAGGATGAGTCTCCTGTGTCAGGGCTGGCACATCTGCAATGCGTCGTGTT 9528 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 318 TTGCCGGTGTGAGGATGAGTCTCCTGTGTCAGGGCTGGCACATCTGCAATGCGTCGTGTT 259 Query 9529 GTTGTCCGGTGTACGTCACAATTTTCTTAACCTGAAGTGACGAGGAGCCGGAAAATGTCT 9588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 258 GTTGTCCGGTGTACGTCACAATTTTCTTAACCTGAAGTGACGAGGAGCCGGAAAATGTCT 199 Query 9589 GACCACACTATCCCTGAATATCTGCAACCCGCACTGGCACAACTGGAAAAGGCCAGAGCC 9648 ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 198 GACAACACCATCCCTGAATATCTGCAACCCGCGCTGGCACAACTGGAAAAGGCCAGAGCC 139 Query 9649 GCCCATCTTGAGAACGCCCGCCTGATGGATGAGACCGTCACGGCCATTGAACGGGCAGAG 9708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 138 GCCCATCTTGAGAACGCCCGCCTGATGGATGAGACCGTCACGGCCATTGAACGGGCAGAG 79 Query 9709 CAGGaaaaaaaTGCGCTGGCGCAGGCCGACGGAAACGACGCTGACGACTGGCGCACGGCC 9768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78 CAGGAAAAAAATGCGCTGGCGCAGGCCGACGGAAACGACGCTGACGACTGGCGCACGGCC 19 Query 9769 TTTCGTGCAGCCGGTGGT 9786 |||||||||||||||||| Sbjct 18 TTTCGTGCAGCCGGTGGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37073326724224