Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1123 96.9 4e-15 seq2430 84.2 3e-11 seq332 84.2 3e-11 >seq1123 Length=29528 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| |||||| | ||||||||||| ||||||||||||| Sbjct 27421 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 27480 Query 60126 TACTACCGAGGAT 60138 ||||||||||||| Sbjct 27481 TACTACCGAGGAT 27493 Score = 82.4 bits (90), Expect = 9e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 60055 TGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 || ||||| ||||| |||| ||||||||||| ||||| | ||||||||||| || Sbjct 12047 TGTAAAATGGTCTCCCCGGCCCGGAATCGAACCGGCGTCTCGCACGTGACAGGCGCGGAT 11988 Query 60115 ACTCACCACTATACTACCGAGGA 60137 ||| ||||||||||||||||||| Sbjct 11987 ACTAACCACTATACTACCGAGGA 11965 >seq2430 Length=18656 Score = 84.2 bits (92), Expect = 3e-11 Identities = 107/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 ||||| || || || || ||||||||||||| ||| | | ||||| ||| ||| |||| Sbjct 6227 TTACCTGCAAAAATAAGACGCTGCTGGTCGGGCGGGATCCCTTCCTTATCC-TGAATTTT 6285 Query 43101 TG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 || ||| | | | | |||||| || ||| || || | |||||||||||| ||||| Sbjct 6286 TGCTTTCACGTTTTCGATGGTGTCGGACGCTTCAACCTCAAGCGTGATGGTTTTACCCGT 6345 Query 43160 TAGCGTCTTTACAAAGATTTGCATT 43184 || || || || || ||||||||| Sbjct 6346 AAGGGTTTTGACGAAAATTTGCATT 6370 >seq332 Length=47636 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||| ||||| | ||||||||||| |||||||||||| Sbjct 16595 TCTCCCCGGCCCGGAATCGAACCGGCGTCTCGCACGTGACAGGCGCGGATACTCACCACT 16536 Query 60125 ATACTACCGAGGAT 60138 |||||||||||||| Sbjct 16535 ATACTACCGAGGAT 16522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571675846416960