Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2430 105 6e-18 seq2949 84.2 2e-11 >seq2430 Length=18656 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || || || || ||||| ||||| | || |||||| ||||| Sbjct 6369 ATGCAAATTTTCGTCAAAACCCTTACGGGTAAAACCATCACGCTTGAGGTTGAAGCGTCC 6310 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||||| || ||| | ||| ||| |||||||| | |||||||||||| Sbjct 6309 GACACCATCGAAAACGTGAAAGCAAAAATTCAGGATAAGGAAGGGATCCCGCCCGACCAG 6250 Query 31313 CAGCGTCTAATATTCGCTGGCAA 31335 |||||||| || || || || || Sbjct 6249 CAGCGTCTTATTTTTGCAGGTAA 6227 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||||||||| ||||| || || | || ||||| | || Sbjct 4853 ATGCAGATTTTCGTGAAGACTCTGACAGGGAAAACAATTACTTTGGAAGTTGAGGCCTCA 4794 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| | || || | ||| ||||||||| || | |||||||||||| Sbjct 4793 GATACTATCGAGAATGTTAAGGCAAAAATCCAGGACAAGGAGGGGATCCCGCCCGACCAG 4734 Query 31313 CAGCGTCTAATATTCGCTGG 31332 |||||||| || || ||||| Sbjct 4733 CAGCGTCTTATTTTTGCTGG 4714 >seq2949 Length=15852 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| ||||| ||||| || || || |||||||| |||||| | || || || | Sbjct 11327 AAAGATGCAGATTTTTGTAAAAACCCTTACTGGCAAAACAATCACCTTAGAGGTGGAGGC 11386 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || |||| | |||| || ||| || || ||||||||||||| | || || || Sbjct 11387 TTCGGACACAATTGAAAATGTGAAAGCGAAGATTCAGGACAAGGAAGGCATCCCTCCGGA 11446 Query 31309 CCAGCAGCGTCTAATATTCGCTGG 31332 ||||||||| |||| || || || Sbjct 11447 TCAGCAGCGTTTAATTTTTGCAGG 11470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445655894509440