Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_004813.1 Length=57930 Score E Sequences producing significant alignments: (Bits) Value seq14794 1393 0.0 >seq14794 Length=910 Score = 1393 bits (1544), Expect = 0.0 Identities = 786/795 (99%), Gaps = 0/795 (0%) Strand=Plus/Minus Query 52290 TGAACCGCCCCGGGAATCCTGGAGACTAAACTCCCTGAGAAAGAGGTAAACAGGATGACT 52349 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 835 TGAACCGCCCCGGGAATCCTGGAGACTAAACTTCCTGAGAAAGAGGTAAACAGGATGACT 776 Query 52350 AAAAATACTCGTTTTTCCCCCGAAGTCCGTCAGCGGGCGATTCGTATGGTTCTGGAAAGT 52409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 775 AAAAATACTCGTTTTTCCCCCGAAGTCCGTCAGCGGGCGATTCGTATGGTTCTGGAAAGT 716 Query 52410 CAGGATGAATATGACTCACAGTGGGCGGCAATTTGTTCCATTGCCCCAAAGATTGGCTGT 52469 ||| |||||||||||||| |||||| |||||||||||||||| ||||||||||||||| Sbjct 715 CAGAGCGAATATGACTCACAATGGGCGACAATTTGTTCCATTGCTCCAAAGATTGGCTGT 656 Query 52470 ACGCCGGAGACTCTGCGTGTCTGGGTTCGCCAGCATGAGCGGGATACCGGGGGCGGTGAT 52529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 655 ACGCCGGAGACTCTGCGTGTCTGGGTTCGCCAGCATGAGCGGGATACCGGGGGCGGTGAT 596 Query 52530 GGAGGGCTCACCACCGCTGAACGTCAGCGTCTGAAAGAGCTGGAGCGTGAAAATCGTGAA 52589 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 595 GGAGGGCTCACCACCGCTGAACGTCAGCGTCTGAAAGAGCTGGAACGTGAAAATCGTGAA 536 Query 52590 CTGCGCCGCAGTAACGATATCCTTCGCCAGGCTTCCGCTTATTTTGCGAAGGCGGAGTTC 52649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 535 CTGCGCCGCAGTAACGATATCCTTCGCCAGGCTTCCGCTTATTTTGCGAAGGCGGAGTTC 476 Query 52650 GACCGCCTCTGGAAAAAATGATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCG 52709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 475 GACCGCCTCTGGAAAAAATGATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCG 416 Query 52710 GACCGCTATGCAGCGAACTGCATATTGCCCCGTCAACGTATTACCACTGTCAGCAACAGC 52769 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 415 GACCGCTATGCAGCGAACTGCATATTGCCCCGTCAACGTATTACCACTGTCAGCAACAGC 356 Query 52770 GACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCGCGATGACTGGCTGAAGAAAGAGA 52829 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 355 GACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCGCGATGACTGGCTGAAGAAAGAGA 296 Query 52830 TACAGCGCGTATACGATGAAAATCACAAGGTATACGGTGTGCGTAAAGTCTGGCGTCAGT 52889 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 295 TACAGCGCGTATACGATGAAAATCACAAGGTATACGGTGTGCGTAGAGTCTGGCGTCAGT 236 Query 52890 TGTTACGGGAAGGTATCAGAGTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATGG 52949 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 235 TGTTACGGGAAGGTATCAGAGTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATGG 176 Query 52950 GACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACGACCATCAGCCGGAAAGCCGTTG 53009 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 175 GACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACGACCATCAGCCGGAAAGCCGTTG 116 Query 53010 CCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTGTGGGTGG 53069 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 115 CCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTGTGGGTGG 56 Query 53070 CTGATTTTACTTACG 53084 ||||||||||||||| Sbjct 55 CTGATTTTACTTACG 41 Score = 1323 bits (1466), Expect = 0.0 Identities = 768/791 (97%), Gaps = 0/791 (0%) Strand=Plus/Minus Query 49449 TTGAACCGCCCCGGAAATCCTGGAGACTAAACTCCCTGAGAAAGAGGTAAACAGGATGAC 49508 |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 836 TTGAACCGCCCCGGGAATCCTGGAGACTAAACTTCCTGAGAAAGAGGTAAACAGGATGAC 777 Query 49509 TAAAAATACTCGTTTTTCCCCCGAAGTCCGTCAGCGGGCGATTCGTATGGTTCTGGAAAG 49568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 776 TAAAAATACTCGTTTTTCCCCCGAAGTCCGTCAGCGGGCGATTCGTATGGTTCTGGAAAG 717 Query 49569 TCAGGATGAATATGACTCACAGTGGGCGGCAATTTGTTCCATTGCCCCAAAGATTGGCTG 49628 |||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||| Sbjct 716 TCAGAGCGAATATGACTCACAATGGGCGACAATTTGTTCCATTGCTCCAAAGATTGGCTG 657 Query 49629 TACGCCGGAGACTCTGCGTGTCTGGGTTCGCCAGCATGAGCGGGATACCGGGGGCGGTGA 49688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 656 TACGCCGGAGACTCTGCGTGTCTGGGTTCGCCAGCATGAGCGGGATACCGGGGGCGGTGA 597 Query 49689 TGGTGGGCTCACCAGCGCTGAACGTCAGCGTCTGAAAGAGCTGGAACGTGAAAATCGTGA 49748 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 596 TGGAGGGCTCACCACCGCTGAACGTCAGCGTCTGAAAGAGCTGGAACGTGAAAATCGTGA 537 Query 49749 ACTGCGCCGCAGTAACGATATCCTTCGCCAGGCTTCCGCTTATTTTGCGAAGGCGGAGTT 49808 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 536 ACTGCGCCGCAGTAACGATATCCTTCGCCAGGCTTCCGCTTATTTTGCGAAGGCGGAGTT 477 Query 49809 CGACCGCCTCTGGAAAAAATGATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTC 49868 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 476 CGACCGCCTCTGGAAAAAATGATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTC 417 Query 49869 GGACCGGTATGCAGCGAACTGCATATTGCCCCGTCAACGTATTACCATTGTCAGCAACAG 49928 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 416 GGACCGCTATGCAGCGAACTGCATATTGCCCCGTCAACGTATTACCACTGTCAGCAACAG 357 Query 49929 CGACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCACGATGACTGGCTGAAGAAAGAG 49988 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 356 CGACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCGCGATGACTGGCTGAAGAAAGAG 297 Query 49989 ATACAGCGCGTATACGATGAAAATCACCAGGTATACGGTGTGCGTAAAGTCTGGCGTCAG 50048 ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| Sbjct 296 ATACAGCGCGTATACGATGAAAATCACAAGGTATACGGTGTGCGTAGAGTCTGGCGTCAG 237 Query 50049 TTGTTACGGGAAGGTATCAGAGTGGCCAGATGCACTGTGGCACGTCTCATGGCAGTTATG 50108 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 236 TTGTTACGGGAAGGTATCAGAGTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATG 177 Query 50109 GGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGCACTACCGTCAGCCGGAAAGCCGTT 50168 ||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||| Sbjct 176 GGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACGACCATCAGCCGGAAAGCCGTT 117 Query 50169 GCCGCATGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGTCCAGACCAGTTGTGGGTG 50228 |||||| |||||||||||||||||||||||||||||||||| || |||||| |||||||| Sbjct 116 GCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTGTGGGTG 57 Query 50229 GCTGATTTTAC 50239 ||||||||||| Sbjct 56 GCTGATTTTAC 46 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185210771662528