Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq13931 1573 0.0 seq18843 744 0.0 seq11628 637 3e-178 >seq13931 Length=1057 Score = 1573 bits (1744), Expect = 0.0 Identities = 961/1020 (94%), Gaps = 0/1020 (0%) Strand=Plus/Plus Query 63571 CCGCTGAGTGTCAGCAGGAATACGCTGGCGAACATTACCCGCCGCAACCAGTTGTTTCTG 63630 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1 CCGCTGAGTGTCAGCAGGAATGCGCTGGCGAACATTACCCGCCGCAACCAGTTGTTTCTG 60 Query 63631 AACTTCAGCTTTTCGTTCCATTTGCCTGTCAGCATACTTGGCTTGTTCTGATTCATTTTT 63690 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 61 AACTTCAGCTTTTCGTTCCATTTGCCTGTCAGCATATTTGGCTTGTTCTGATTCATTTTT 120 Query 63691 CACTTCCTGGCTGTGAAAATGTTGCTCTGCTTTGTTCATCGTCTCAATGGTCTGGTTAAG 63750 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CACTTCCTGGCTGTGAAAATGTTGCTCTGCTTTGTTCATCGTCTCAATGGTCTGGTTAAG 180 Query 63751 ATCCATTATTGACTTATCACGTTCCTTAACAGCCTGATCAAGACTGCCAATTTTCTCTAT 63810 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 181 ATCCATTATTGACTTATCACGTTCCTTAACAGCCTGATCAAGACTGCCAATTTTCTCCAT 240 Query 63811 GGCTTGCTTTAGCTGATGACGTTCCCATGCAAACCCAGCACCAACAAGTGCGCAAATCAG 63870 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GGCTTGCTTTAGCTGATGACGTTCCCATGCAAACCCAGCACCAACAAGTGCGCAAATCAG 300 Query 63871 AACAAGAACACCAGTAGCAGCAAGTTTCTCCTTCAAAGACAAAGCTGTTTTTAACGTAGA 63930 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 AACAAGAACACCAGTAGCAGCAAGTTTCTCCTTCAAAGACAAAGCTGTTTTTAACGTAGA 360 Query 63931 AAAGAATGACATGTCTTCCTCCTGAAGAAAAATTATCAATGAAGTCCTTTGTTACTGTGC 63990 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 AAAGAATGACATGTCTTCCTCCTGAAGAAAAATTATCAATGAAGTCCTTTGTTACTGTGC 420 Query 63991 CGCTTTGTTTAATTCATCAAGAACAGAATCAGGAACCAAAGCGGCAACTGCGCTGGCTGT 64050 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 CGCTTTGTTTAATTCATCAAGAACAGAATCAGGAACCAAAGCGGCAACTGCGCTGGCTGT 480 Query 64051 GCTGGCCTTATTTGCTGATGCTTCCGCAAGCGCGGTACCGATAGCATGGTTATAAGCAGT 64110 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 GCTGACCTTATTTGCTGATGCTTCCGCAAGCGCGGTACCGATAGCATGGTTATAAGCAGT 540 Query 64111 TATGGCTACGCTGGCGCTTTCCTTCGCTCGTTCATACTGCTGTTGCAATGCTGCTACCGG 64170 |||||||||| |||||||||| ||||||||||||||||||||||| || || | | || Sbjct 541 TATGGCTACGTTGGCGCTTTCATTCGCTCGTTCATACTGCTGTTGTAACGCAGTTGTGGG 600 Query 64171 TACTGTTGTCTGGTCGAAAAAAGCACCAAATTGTTCAGTAGCTTCCTTCAGTGCTTCAAC 64230 ||||||||||| ||||| | | ||||| |||||||| ||| | ||||| | ||||| Sbjct 601 CGTTGTTGTCTGGTTGAAAACAACCCCAAACTGTTCAGTTGCTACTTTCAGAGATTCAAT 660 Query 64231 TTGTTGTTCTGTCAGTGCTGGTGGGGGAGTGACTGCGCCGCCACCTGAATCAGAGCCTGA 64290 ||| | |||||| |||||||||||||||||| | | |||||| |||||| |||||||||| Sbjct 661 TTGCTCTTCTGTTAGTGCTGGTGGGGGAGTGGCAGTGCCGCCGCCTGAACCAGAGCCTGA 720 Query 64291 CGAGCTTCCTGAGCCTGTGTTAAGGGTCTGGTTAATGTCCTCCATAGCAGCGACTAAACT 64350 ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||| Sbjct 721 CGAGCTTCCTGAGCCAGTGTTAAGGGTCTGGTTAATCTCCCCCATAGCAGCGACTAAACT 780 Query 64351 CGACGTATTAAGCGCATTTACAGCGTCCTCAAGCGATTTCGTTGTAGTCGCGTCACCAAT 64410 || ||||||||||| || |||||||||||||||||||| || || || | |||||||| Sbjct 781 TGATGTATTAAGCGCGTTAACAGCGTCCTCAAGCGATTTAGTAATATTCACATCACCAAT 840 Query 64411 GGCAATAGAGATCGGCAGTTCTGAAACTTCTCGCTCATTAGCACGACAGTAAACATCCCA 64470 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 841 GGCAATAGAGATCGGCAGTTCTGAAACTTCTCGCTCATTAGCACGGCAGTAAACATCCCA 900 Query 64471 ACCAATATCGAGTTGAAGGAGCATTGACAGATCAGCATAACCAGCCAACAGGTCCGCGTG 64530 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 901 ACCAATATCGAGTTGAAGCAGCATTGACAGATCTGCATAACCAGCCAACAGGTCCGCGTG 960 Query 64531 CTGAGTTGCCAGCCCTCCAATATTCGTTAAACCGGTTGCGGTTGTTCTGATCGTTGAAAC 64590 || ||||||||| ||||||| |||||||| |||||| ||||||||| ||||||||||| Sbjct 961 CTTAGTTGCCAGTTCTCCAATGTTCGTTAAGTCGGTTGTGGTTGTTCTTATCGTTGAAAC 1020 >seq18843 Length=549 Score = 744 bits (824), Expect = 0.0 Identities = 442/462 (96%), Gaps = 0/462 (0%) Strand=Plus/Plus Query 2875 TCAATGACTGCTGCATGGATCAATAACGAGCTGATAATGGCTGAGCGGACCAGCTACCCT 2934 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1 TCAATGACTGCTGCATGGATCAACAACGAGCTGATAATGGCTGAGCGGACCAGCTACCCT 60 Query 2935 GAACGCCGCCGCGATATGGAACTCCAGCTGCTGCGCGAATTGCGAGAAAAAGAGGAAAAG 2994 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GAACGCCGCCGCGATATGGAACTCCAGCTGCTGCGCGAATTGCGAGAAAAAGAGGAAAAG 120 Query 2995 GGTTTTATCGTGCTGGTGGAAGAGGAAAACAGCTTTATTACTGGACGAGTTGGCCAGCGT 3054 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 121 GGTTTTATCGTGCTGGTGGAAGAGGAAAACAGCTTTATTACCGGTCGAGTTGGCCAGCGT 180 Query 3055 GTAAGGTTGCGTGATCCCTTCATGAACGGTAGACCGGTACTGATTGAAGCAATGCAGATT 3114 ||||||||||| ||||||||||||||||| || |||||||| |||||||||||||||||| Sbjct 181 GTAAGGTTGCGCGATCCCTTCATGAACGGCAGGCCGGTACTAATTGAAGCAATGCAGATT 240 Query 3115 TACAAGGAATTGGAACGCCAGAAAGCGATCAAGTTACCGCGCAAGGAATCCGGCAAATAC 3174 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TACAAGGAGTTGGAACGCCAGAAAGCGATCAAGTTACCGCGCAAGGAATCCGGCAAATAC 300 Query 3175 ATCCTCCACCAAAGCATCTTCGATTCCGAACATGACAAAAAAGGCGATGAATTTTTCAAC 3234 |||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| Sbjct 301 ATCCTCCACCAAAGCATCTTCGATTCCGAACACGATAAAAAAGGCGATGAGTTTTTCAAC 360 Query 3235 ATCAACTGGAGCGAAATAACGACAGAGCACGTTCTGACGTTGTTATGCTGCTTCGCAACG 3294 |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 361 ATCAACTGGATCGAAATAACGACAGAGCATGTTCTGACGTTGTTATGCTGCTTCGCAACA 420 Query 3295 GAATACAACAACGTTGCAAACTCCGACTACATCAGGGCAATG 3336 |||||||||||||| | || | | |||||||||||| ||||| Sbjct 421 GAATACAACAACGTGGTAAGCGCAGACTACATCAGGACAATG 462 >seq11628 Length=1734 Score = 637 bits (706), Expect = 3e-178 Identities = 355/356 (99%), Gaps = 0/356 (0%) Strand=Plus/Minus Query 7648 TTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCT 7707 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 356 TTAGGGAAGGTGCGAATAAGTGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCT 297 Query 7708 TCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTT 7767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 296 TCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTT 237 Query 7768 CTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCAT 7827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 236 CTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCAT 177 Query 7828 TTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTT 7887 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 176 TTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTT 117 Query 7888 CAGCAACCCCTTGTATCTGGCTTTCACGAAGCCGAACTGTCGCTTGATGATGCGAAATGG 7947 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 116 CAGCAACCCCTTGTATCTGGCTTTCACGAAGCCGAACTGTCGCTTGATGATGCGAAATGG 57 Query 7948 GTGCTCCACCCTGGCCCGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTT 8003 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 56 GTGCTCCACCCTGGCCCGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303161907294072