Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2430 107 4e-18 >seq2430 Length=18656 Score = 107 bits (118), Expect = 4e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || || || || || | || |||||||| || || |||||||| || ||||| ||| Sbjct 6227 TTACCTGCAAAAATAAGACGCTGCTGGTCGGGCGGGATCCCTTCCTTATCCTGAATTTTT 6286 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 || || ||| ||||||||||| | | ||| || || | ||||||||||| ||||| Sbjct 6287 GCTTTCACGTTTTCGATGGTGTCGGACGCTTCAACCTCAAGCGTGATGGTTTTACCCGTA 6346 Query 68439 AGGGTCTTGACGAATATCTGCATT 68462 ||||| |||||||| || |||||| Sbjct 6347 AGGGTTTTGACGAAAATTTGCATT 6370 Score = 100 bits (110), Expect = 5e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 || || || || || | ||||| ||||||||||| |||||||| || ||||| ||||| Sbjct 6685 CCTGCAAAAATAAGACGCTGTTGATCGGGTGGAATTCCTTCCTTATCCTGAATTTTTGCT 6744 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || || ||| || ||||| | | ||| |||||||| ||||| ||||| || || || Sbjct 6745 TTCACATTCTCAATTGTGTCGGAAGCTTCGACTTCCAAAGTGATTGTTTTGCCAGTAAGA 6804 Query 68442 GTCTTGACGAATATCTGCAT 68461 || ||||| || || ||||| Sbjct 6805 GTTTTGACAAAGATTTGCAT 6824 Score = 84.2 bits (92), Expect = 4e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || ||||| || | | |||||| || || ||||| ||||||||||| |||||||| Sbjct 5324 CTTACCAGCGAAAATTAAACGTTGTTGATCCGGAGGAATCCCTTCCTTGTCCTGAATCTT 5383 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 || || || ||| || || || | | || ||||| | || || ||||| || || Sbjct 5384 CGCTTTAACATTCTCAATCGTATCAGACGCCTCAACTTCGAGCGTTATAGTTTTCCCGGT 5443 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 || || || ||||| |||||||| Sbjct 5444 AAGAGTTTTAACGAAAATCTGCAT 5467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921393929807040