Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2430 96.9 3e-15 seq2949 89.7 4e-13 >seq2430 Length=18656 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 114240 TTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTT 114299 |||||||| | || | ||||||||| ||||||||||| ||||||||||| ||| ||| Sbjct 5622 TTACCAGCAAAAATCAAACGCTGTTGATCCGGAGGAATCCCTTCTTTGTCCTGAATTTTT 5681 Query 114300 TGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTC 114359 ||| | | ||||| ||||| | | || || || | || | |||||||| || Sbjct 5682 GCTTTGACATTTTCAATCGTGTCAGACGCCTCAACTTCAAGAGTTATGGTTTTGCCAGTA 5741 Query 114360 AGAGTTTTTACAAAAATCTGCAT 114382 || ||||| |||||||||||||| Sbjct 5742 AGCGTTTTCACAAAAATCTGCAT 5764 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/154 (74%), Gaps = 1/154 (1%) Strand=Plus/Plus Query 114237 TGTT-TACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAAT 114295 |||| |||| || | || ||||||||||| || || ||||| ||||| || || ||| Sbjct 6678 TGTTATACCTGCAAAAATAAGACGCTGTTGATCGGGTGGAATTCCTTCCTTATCCTGAAT 6737 Query 114296 CTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCC 114355 ||| ||| | | |||| ||||||| | |||||| |||| || | |||||||| Sbjct 6738 TTTTGCTTTCACATTCTCAATTGTGTCGGAAGCTTCGACTTCCAAAGTGATTGTTTTGCC 6797 Query 114356 GGTCAGAGTTTTTACAAAAATCTGCATGGCTTAA 114389 || |||||||| ||||| || ||||||| |||| Sbjct 6798 AGTAAGAGTTTTGACAAAGATTTGCATGGTTTAA 6831 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 114240 TTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTT 114299 ||||||||| | || | ||| ||||| ||||||||||| ||||| ||||| |||||| Sbjct 5325 TTACCAGCGAAAATTAAACGTTGTTGATCCGGAGGAATCCCTTCCTTGTCCTGAATCTTC 5384 Query 114300 TGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTC 114359 ||| | | |||| || || | | || || || | || | ||||| ||||| Sbjct 5385 GCTTTAACATTCTCAATCGTATCAGACGCCTCAACTTCGAGCGTTATAGTTTTCCCGGTA 5444 Query 114360 AGAGTTTTTACAAAAATCTGCAT 114382 |||||||| || ||||||||||| Sbjct 5445 AGAGTTTTAACGAAAATCTGCAT 5467 >seq2949 Length=15852 Score = 89.7 bits (98), Expect = 4e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 114241 TACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTT 114300 |||| || | || | |||||| || |||||||| |||||||| ||||| |||||| Sbjct 11472 TACCTGCAAAAATTAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGAATCTTCG 11413 Query 114301 GTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCA 114360 ||| | | ||||| ||||| | | || || || | ||| | |||||||| || | Sbjct 11412 CTTTCACATTTTCAATTGTGTCCGAAGCCTCCACCTCTAAGGTGATTGTTTTGCCAGTAA 11353 Query 114361 GAGTTTTTACAAAAATCTGCAT 114382 | |||||||||||||||||||| Sbjct 11352 GGGTTTTTACAAAAATCTGCAT 11331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420032852465184