Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_009234.1 Length=35741 Score E Sequences producing significant alignments: (Bits) Value seq8026 152 1e-32 seq15822 104 5e-18 >seq8026 Length=4067 Score = 152 bits (168), Expect = 1e-32 Identities = 363/544 (67%), Gaps = 20/544 (4%) Strand=Plus/Plus Query 4606 GAGATTCTCGATTACGTCGAGTGCTGGTCGAACGGCGAATGGTTCGAGCCGCCGGTCAGC 4665 || ||||| ||||||||||||||| |||||| ||||| ||||| ||||||||| Sbjct 218 GACATTCTGGATTACGTCGAGTGCATCAGTAACGGCAGATGGTATGAGCCACCGGTCAGC 277 Query 4666 TTCGCCGGCCTGGCGAAATCGTTTCGCGCGAGCACGCACCATAGCTCGGCGCTGTTCTTC 4725 || |||| ||||| ||| | || || | ||| || ||||| || | | | || Sbjct 278 TTTACCGGTCTGGCAAAAAGCCTGCGTGCTGCCGTGCATCACAGCTCACCGATTTACGTC 337 Query 4726 AAGGCGAACGTGCTGGCGTCGACGTTCCGCCCGCACCGCTGGCTGTCGCGGCACGCGTTC 4785 || || | ||||| || ||||| |||||||| |||||||| | ||| | ||| Sbjct 338 AAACGCAATATTCTGGCTTCAACGTTTATCCCGCACCCGTGGCTGTCCCAGCAGGATTTC 397 Query 4786 GAGCGGTGGGCGCTCGATTTCCTGACGTTCGGCAACGGCTATCTGGAACGCCG---CCGC 4842 || | | ||| ||||| ||| |||||| || | | ||||||| || | || Sbjct 398 AGCCGCTTTGTGCTGGATTTTCTGGTGTTCGGTAATGCGTTTCTGGAAAAGCGTTACAGC 457 Query 4843 AACAT-GGTCGGCGGCACGCTGCGGCTCGAGCCCGCGCTCGCGAAGTACGTCCGGCGCA- 4900 | || ||| | | || | | || || || | | || || || ||| || Sbjct 458 ACCACCGGTAAG-GTCA---TCAGACTGGAAACCTCACCGGCAAAATATACCCGCCGTGG 513 Query 4901 -----AGGCCGATTTCAGCGGCTTCGTGTACGTGAACGGCTGGCAGGAGCGGCACGAGTT 4955 ||| ||| | | | | ||| ||| || | |||| | | || Sbjct 514 CGTGGAGGAGGATGTTTACTGGTGGGTGC-CGTC-----CTTCAACGAGCCGACAGCCTT 567 Query 4956 CGAGCCCGACAGCGTGTTCCAGCTCGTGCGGCCGGACATCAATCAGGAGGTCTATGGCCT 5015 || ||||| | |||||| || || || |||||| || ||||||||| | || ||||| Sbjct 568 CGCGCCCGGCTCCGTGTTTCACCTGCTGGAGCCGGATATTAATCAGGAGCTGTACGGCCT 627 Query 5016 GCCCGAGTATCTGAGCTCGCTGCACTCGGCCTGGCTGAACGAATCGTCGACGCTGTTCCG 5075 ||| || ||||| ||| | || |||| ||||||||||| || || | ||||||||||| Sbjct 628 GCCGGAATATCTCAGCGCCCTTAACTCTGCCTGGCTGAATGAGTCAGCCACGCTGTTCCG 687 Query 5076 GCGCAAGTATTACGAGAACGGCAGCCACGCCGGCTTCATCCTGTACATGACCGACGCCGC 5135 |||||||||||||| |||||| || ||||| | |||| ||||| | ||||| |||| Sbjct 688 CCGCAAGTATTACGAAAACGGCGCTCATGCCGGATACATCATGTACGTTACCGATGCCGT 747 Query 5136 GCAG 5139 |||| Sbjct 748 GCAG 751 >seq15822 Length=778 Score = 104 bits (114), Expect = 5e-18 Identities = 300/457 (66%), Gaps = 11/457 (2%) Strand=Plus/Plus Query 3149 TTCGACTATCAGAAAGTCTGGTATCGGAACGGC---GATCAGCGCACGCGCAACATCCTG 3205 |||||||||||| ||||||||| ||| || || |||| ||| | |||||| Sbjct 246 TTCGACTATCAGTTGCACTGGTATCGCGCCGGGCTTGAGCACCGCATCCGCGATATCCTG 305 Query 3206 AAATCGCGGCAGATCGGTGCGACGTGGTACTTCGCGCGCGAGGCGCTCGTCGACGCGCTC 3265 ||||| || ||||| || || |||| || || | ||||||||||| | ||| || Sbjct 306 AAATCCCGCCAGATTGGCGCAACGTTTTATTTTTCCCGCGAGGCGCTGCTGCGCGCCCTG 365 Query 3266 GACACCGACCGCAATCAGATCTTCCTATCGGCCAGCAAGGCGCAGGCGCACGTCTTCAAG 3325 | |||| | || ||||| || || |||||||| || |||||||| | || ||| Sbjct 366 AAAACCGGTCATAACCAGATTTTTCTGTCGGCCAGTAAAACGCAGGCGTATGTGTTCCGC 425 Query 3326 CAATACATCA-CGCAGTTCGCGCGCGATGCCGCCGACGTCGAGCTCACGGGCGACCCGAT 3384 ||||||||| ||| || || | || | ||||| || || || || |||||||| Sbjct 426 GAATACATCATCGC-CTTTGC---CCATCTGGTTGACGTTGACCTTACCGGTGACCCGAT 481 Query 3385 CATCTTG---CCGAGCGGTGCGACGCTGTACTTCCTGGGGACGAACGCGCGTACCGCGCA 3441 || || | ||| || | ||| || || || || ||| | |||||||| Sbjct 482 TGTCCTGGGCAATAACGGCGCAAAACTGATTTTTCTCGGCACCAACTCCAACACCGCGCA 541 Query 3442 GTCGTATCACGGCAACTTCTATTTCGACGAATACTTTTGGGTTCCGAAGTTCCGCGAGTT 3501 | || ||||| || | || ||||||| || ||| | ||||| || | | | Sbjct 542 GAGCCATAACGGCGACCTGTACGTCGACGAGATTTTCTGGATCCCGAATTTTCAGGTACT 601 Query 3502 GAACAAGGTTGCGTCGGGCATGGCGATGCACAAGCGCTGGCGCAAGACCTACTTCAGCAC 3561 | ||||| || || || ||||| || | | | |||| |||||| ||| ||| Sbjct 602 GCGTAAGGTGGCATCAGGTATGGCCTCACAGAGTCACCTGCGCTCGACCTATTTCTCCAC 661 Query 3562 GCCGTCGAGTGTCACGCACGAGGCGTTCGCGTTCTGG 3598 ||||| | | ||||||| || | | |||||||| Sbjct 662 CCCGTCCACGCTGGCGCACGACGCCTACCCGTTCTGG 698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114222693647952