Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_009382.1 Length=38760 Score E Sequences producing significant alignments: (Bits) Value seq15822 215 1e-51 seq8026 176 1e-39 >seq15822 Length=778 Score = 215 bits (238), Expect = 1e-51 Identities = 463/686 (67%), Gaps = 12/686 (2%) Strand=Plus/Minus Query 4861 CCGCGGTTGAACAGTGCGCCGGACCAGAACGGATAGGCCTCATGCGACAAGCTGGACGGC 4920 || ||||| |||||| | || ||||||||||| ||||| || |||| || ||||||| Sbjct 721 CCCCGGTTAAACAGTTCACCCGACCAGAACGGGTAGGCGTCGTGCGCCAGCGTGGACGGG 662 Query 4921 GTGGAGAAGTAGGTCTGACGCCAGTGCTTGTGGATCGCCATGCCGGAGGCGACCTTGCGC 4980 |||||||| |||||| ||| ||| | || ||||| || || || ||||| ||| Sbjct 661 GTGGAGAAATAGGTCGAGCGCAGGTGACTCTGTGAGGCCATACCTGATGCCACCTTACGC 602 Query 4981 AGTTCCTGGAAGCGCGGCACCCAGAAGTATTCATCGAAGTACAGGTTGCCGTGATACGAC 5040 ||| |||| || ||| | |||||| || |||| |||||||| ||||| || | Sbjct 601 AGTACCTGAAAATTCGGGATCCAGAAAATCTCGTCGACGTACAGGTCGCCGTTATGGCTC 542 Query 5041 TGCGCGGTGCGGGCGTTCGTGCCGAGAAAGTAGAGCGTGGCGCCG---TTGGGCAGCACC 5097 ||||||||| || ||| ||||||||||| || | |||||| ||| ||| || Sbjct 541 TGCGCGGTGTTGGAGTTGGTGCCGAGAAAAATCAGTTTTGCGCCGTTATTGCCCAGGACA 482 Query 5098 ATCGGATCGCCCTTCAGCTCGATCCCGGCCGCGTCCTTGGCGAACTGGATGATGTATTGC 5157 ||||| || || | || || | || | | | ||| || ||||||||||| Sbjct 481 ATCGGGTCACCGGTAAGGTCAA---CGTCAACCAGATGGGCAAAGGCGATGATGTATTCG 425 Query 5158 TTGAAGACGTGCGCCTGCGCCTTGCTGGCCGATAGGAAAATCTGGTTGCGGCCGGTGGTC 5217 ||| || | |||||||| || |||||||| || ||||||||||| | ||||| || Sbjct 424 CGGAACACATACGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTATGACCGGTTTTC 365 Query 5218 AGCGCGTCGATGAACGCCTCGCGTGCGAAGTACCACGTCGCGCCGATCTGCCGGCTCTTG 5277 || ||| | | ||||||||| | || || |||| ||||| ||||| ||| || Sbjct 364 AGGGCGCGCAGCAGCGCCTCGCGGGAAAAATAAAACGTTGCGCCAATCTGGCGGGATTTC 305 Query 5278 AGCAGGTTGCGGATGCGCTCGACCTGCCCAGCCTCGTACCAGACGCGCTGGTAATCGAAC 5337 || | | ||||||||| | | |||| || |||||| ||| || ||||| Sbjct 304 AGGATATCGCGGATGCGGTGCTCAAGCCCGGCGCGATACCAGTGCAACTGATAGTCGAAA 245 Query 5338 ATCGAGTCGCGGAAGGCCTCCAGGAGCTGCGTCTGT-TCCTCGGGACTGATCGCATTGCG 5396 | || ||| || | |||| || | ||||| ||||| ||| Sbjct 244 GACTGCTCAAAGAAAATCTGCTCCAGCT-TTTCGATGGCCTCGTCACTGAAAAAATTCTT 186 Query 5397 CTCGGGCTTGCTGCGCGGCCCCTTGTTGCGGTTCGCCACCTTCGGGTTCAGGTCGGTTTC 5456 | || |||| ||| || ||||||||||| || || ||||| || ||||| | || Sbjct 185 TTTCGGTTTGCGCCGCCCGCCTTTGTTGCGGTTAGCGACGTTCGGATTAAGGTCTGCCTC 126 Query 5457 GTTGCCG--CTGGCCTCGTACCGGCGCACGCGCGCCATGCGCTCCATTTGTCGGCCAAGC 5514 ||||||| ||||| ||| || || || |||| || || || || || || ||| Sbjct 125 GTTGCCGGTCTGGC--TGTAGCGATTTACCCGTGCCAGTCGTTCAATCTGGCGTCCCAGC 68 Query 5515 AGGTCGATTTCCTTGTAGTCCCGGCC 5540 ||||| ||||||||| |||| | ||| Sbjct 67 AGGTCAATTTCCTTGAAGTCACCGCC 42 >seq8026 Length=4067 Score = 176 bits (194), Expect = 1e-39 Identities = 423/633 (67%), Gaps = 8/633 (1%) Strand=Plus/Minus Query 3293 TCGCGCAGCGTGTCGACGTCCTCCTGCTTCTGCGCCGCATCGGTCATGTACAGGATGAAG 3352 ||||| ||| | |||| || | | | |||| | |||||||| | ||||| |||| | Sbjct 780 TCGCGAAGCATTTCGATATCGTTGCGATCCTGCACGGCATCGGTAACGTACATGATGTAT 721 Query 3353 CCGGCGTGCGAGCCGTTCTTGTAGTACCGGCGCCGGAACAGCGTGGCCGATTCGTTCAAC 3412 ||||| || | |||||| | ||| ||| ||| |||||||||||||| || || |||| | Sbjct 720 CCGGCATGAGCGCCGTTTTCGTAATACTTGCGGCGGAACAGCGTGGCTGACTCATTCAGC 661 Query 3413 CACGTGGCGTTCAGCGCGGACAGGTATTCCGGCAGGCCGTACACCTCCTGATTGATGTCC 3472 || | | ||| || ||| || ||||||||||||||||||| ||||||||| || ||| Sbjct 660 CAGGCAGAGTTAAGGGCGCTGAGATATTCCGGCAGGCCGTACAGCTCCTGATTAATATCC 601 Query 3473 GGTTCCTGGAGGTGGAACACCGAGCCGGCGGCGAAGG-TGTACGGCTGCTGCCAGTTCTG 3531 || ||| | ||||| ||||| ||||||| ||||||| ||| ||||| | || | | Sbjct 600 GGCTCCAGCAGGTGAAACACGGAGCCGGGCGCGAAGGCTGT-CGGCTCGTTGAAGGACGG 542 Query 3532 CACaaaaaaaTAGGTGTTCAGGTCGAGCCCGCGCCGAACGTACTTGGCCAGAGGCGTGTC 3591 ||| | | || | | || | || || || || || ||| | | || || Sbjct 541 CACCCACCAGTAAACATCCTCCTCCACGCCACGGCGGGTATATTTTGCCGGTGAGGTTTC 482 Query 3592 GAGCCGGATTGTCCCGCCCAACACGTTTTCGCGGCGCTCCAGGTACGCATTGCCGAACAC 3651 || | ||| | || | | | || ||||| ||||||| |||||||| Sbjct 481 CAGTCTGATGACCTTACCGGTGGTGCTGTAACGCTTTTCCAGAAACGCATTACCGAACAC 422 Query 3652 CTGCCAGTCCAGCACCAGGCGCTCGAACGTCGCGC-GCGACAACAGCGGGTGCGGGATGA 3710 | | | |||||||| | ||| ||| || || | |||| | |||||||||||| | Sbjct 421 CAGAAAATCCAGCACAAAGCGGCTGAA-ATCCTGCTGGGACAGCCACGGGTGCGGGATAA 363 Query 3711 ACGTGCTGA--CCAGGATATTCCGCTTCACGTAGACGGCCGAGCTGTGGTGCGCGGCGGC 3768 |||| ||| |||| ||||| || || ||||| | | |||||||| ||| |||| || Sbjct 362 ACGT--TGAAGCCAGAATATTGCGTTTGACGTAAATCGGTGAGCTGTGATGCACGGCAGC 305 Query 3769 GCGGAACGAGCGCGCCAGGCCATCCCACGGCATGGGCGGTTCATACCACTGGCCCATGCG 3828 || | ||||| || | | || || |||||||| ||| | | Sbjct 304 ACGCAGGCTTTTTGCCAGACCGGTAAAGCTGACCGGTGGCTCATACCATCTGCCGTTACT 245 Query 3829 CATGCACTCGACGTAATCCAGCAACTCGCGCCGGTCCAGCACTTCGACGGGATCGCCGAA 3888 |||||||||||||||||||| | || || ||||| || || || || || || || Sbjct 244 GATGCACTCGACGTAATCCAGAATGTCACGGCGGTCGAGTACCGGCACCGGTTCACCAAA 185 Query 3889 AGAGAACACCTCGGCTTGCGCGGCCCGGTCGGT 3921 | ||| |||| || || ||| | | |||| Sbjct 184 GGTGAATGCCTCCATTTTCGGGGCGCTGGCGGT 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123881218481248