Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2430 102 2e-16 >seq2430 Length=18656 Score = 102 bits (112), Expect = 2e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || ||||| || || |||||||| || ||||| ||||| |||||||| ||||| Sbjct 6227 TTACCTGCAAAAATAAGACGCTGCTGGTCGGGCGGGATCCCTTCCTTATCCTGAATTTTT 6286 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 |||||||||||||| || | ||| || ||| || || |||||||| || || || || Sbjct 6287 GCTTTCACGTTTTCGATGGTGTCGGACGCTTCAACCTCAAGCGTGATGGTTTTACCCGTA 6346 Query 288451 AGAGTCTTGACGAATATCTGCATT 288474 || || |||||||| || |||||| Sbjct 6347 AGGGTTTTGACGAAAATTTGCATT 6370 Score = 95.1 bits (104), Expect = 3e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 ||||| || || |||||||||||| ||| |||||||| |||||||| ||||| ||| Sbjct 6685 CCTGCAAAAATAAGACGCTGTTGATCGGGTGGAATTCCTTCCTTATCCTGAATTTTTGCT 6744 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 ||||| || || || | ||| | ||| ||||| | ||||| || || || || ||| Sbjct 6745 TTCACATTCTCAATTGTGTCGGAAGCTTCGACTTCCAAAGTGATTGTTTTGCCAGTAAGA 6804 Query 288454 GTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| Sbjct 6805 GTTTTGACAAAGATTTGCAT 6824 Score = 91.5 bits (100), Expect = 3e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || ||||| || | ||| |||||| || || ||||| || ||||| || ||| Sbjct 5325 TTACCAGCGAAAATTAAACGTTGTTGATCCGGAGGAATCCCTTCCTTGTCCTGAATCTTC 5384 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 ||||| || || || || | ||| || || ||||||||||| || || |||||||| Sbjct 5385 GCTTTAACATTCTCAATCGTATCAGACGCCTCAACTTCGAGCGTTATAGTTTTCCCGGTA 5444 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| |||||||| Sbjct 5445 AGAGTTTTAACGAAAATCTGCAT 5467 Score = 87.8 bits (96), Expect = 4e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || ||||| || | |||||||||| || ||||| ||||| || || || ||| Sbjct 5010 TTACCAGCGAAAATTAAACGCTGTTGATCCGGCGGTATTCCCTCTTTGTCTTGAATCTTC 5069 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 |||||||| ||||| || | || | || ||||| ||||| ||||| ||||| || Sbjct 5070 GCTTTCACATTTTCAATGGTGTCCGAAGCCTCAACTTCAAGCGTTATCGTTTTCCCAGTA 5129 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| || ||||| Sbjct 5130 AGGGTCTTAACGAAAATTTGCAT 5152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179354652766096