Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq285 105 7e-18 seq2430 87.8 2e-12 >seq285 Length=50150 Score = 105 bits (116), Expect = 7e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 64304 CCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGC 64363 || ||| |||| | |||||||| ||||||||||| || || || ||||| |||||| | Sbjct 46405 CCTGCAAAAATCAATCGCTGCTGATCGGGAGGAATACCCTCCTTATCTTGGATTTTTGCC 46346 Query 64364 TTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAA 64423 || || ||| | || || || || ||||| | ||| | |||||| || |||||| Sbjct 46345 TTCACGTTCTCTATAGTGTCCGAAGCTTCAACTTCAAGAGTAATGGTCTTACCAGTCAAA 46286 Query 64424 GTTTTTACGAAAATTTGCATTTT 64446 ||||| ||||||||||||||||| Sbjct 46285 GTTTTCACGAAAATTTGCATTTT 46263 >seq2430 Length=18656 Score = 87.8 bits (96), Expect = 2e-12 Identities = 112/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 64304 CCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGC 64363 || ||| |||| || ||||| || ||||| ||||||||||| || || || | ||||||| Sbjct 6685 CCTGCAAAAATAAGACGCTGTTGATCGGGTGGAATTCCTTCCTTATCCTG-AATTTTTGC 6743 Query 64364 TTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAA 64422 ||| ||| ||| | ||| || || || ||||| | ||| | || ||||| || | Sbjct 6744 TTTCACATTCTCAATTGTGTCGGAAGCTTCGACTTCCAAAGTGATTGTTTTGCCAGTAAG 6803 Query 64423 AGTTTTTACGAAAATTTGCAT--TTTAATAA 64451 |||||| || || |||||||| ||||| || Sbjct 6804 AGTTTTGACAAAGATTTGCATGGTTTAACAA 6834 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 64304 CCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGC 64363 || ||| |||| || |||||||||||||| || || || || || || || |||||| | Sbjct 4714 CCAGCAAAAATAAGACGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATTTTTGCC 4773 Query 64364 TTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAA 64423 || ||| ||| | ||||| ||| || ||||| | ||| | || || || |||| | Sbjct 4774 TTAACATTCTCGATAGTATCTGAGGCCTCAACTTCCAAAGTAATTGTTTTCCCTGTCAGA 4833 Query 64424 GTTTTTACGAAAATTTGCAT 64443 || || |||||||| ||||| Sbjct 4834 GTCTTCACGAAAATCTGCAT 4853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499520938054080