Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2430 95.1 1e-14 seq2949 89.7 5e-13 >seq2430 Length=18656 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 138472 TTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTT 138531 ||||| | | | || | ||||||||| |||||||| || ||||||||||| ||| |||| Sbjct 5622 TTACCAGCAAAAATCAAACGCTGTTGATCCGGAGGAATCCCTTCTTTGTC-CTGAATTTT 5680 Query 138532 TG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGT 138590 || ||| | | ||| | ||||| | || ||| || || | || | ||||| ||||| Sbjct 5681 TGCTTTGACATTTTCAATCGTGTCAGACGCCTCAACTTCAAGAGTTATGGTTTTGCCAGT 5740 Query 138591 CAGAGTTTTTACAAAAATCTGCAT 138614 || ||||| |||||||||||||| Sbjct 5741 AAGCGTTTTCACAAAAATCTGCAT 5764 >seq2949 Length=15852 Score = 89.7 bits (98), Expect = 5e-13 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 138473 TACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTT 138532 |||| | | | |||| |||||| || |||||||| || ||||| ||||| ||| | || Sbjct 11472 TACCTGCAAAAATTAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCC-TGAATCTTC 11414 Query 138533 GTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTC 138591 | ||| | | ||| | ||||| | | ||||||||| | || | ||||| ||||| Sbjct 11413 GCTTTCACATTTTCAATTGTGTCCGAAGCCTCCACCTCTAAGGTGATTGTTTTGCCAGTA 11354 Query 138592 AGAGTTTTTACAAAAATCTGCAT 138614 || |||||||||||||||||||| Sbjct 11353 AGGGTTTTTACAAAAATCTGCAT 11331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496139376551040