Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq285 95.1 1e-14 seq2430 87.8 2e-12 seq2949 84.2 2e-11 >seq285 Length=50150 Score = 95.1 bits (104), Expect = 1e-14 Identities = 107/141 (76%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 45201 CCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 45260 ||||| | |||||||| ||||| || || ||||| || || |||||||| |||||| Sbjct 46405 CCTGCAAAAATCAATCGCTGCTGATCGGGAGGAATACCCTCCTTATCTTGGATTTTTGCC 46346 Query 45261 TTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAG 45319 || | || | |||| ||||| |||| || ||||| ||||||| || || || || | Sbjct 46345 TTCA-CGTTCTCTATAGTGTCCGAAGCTTCAACTTCAAGAGTAATGGTCTTACCAGTCAA 46287 Query 45320 AGTTTTTACAAAAATTTGCAT 45340 |||||| || ||||||||||| Sbjct 46286 AGTTTTCACGAAAATTTGCAT 46266 >seq2430 Length=18656 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || || || || || |||||||| || || ||||| |||||||| || Sbjct 5010 TTACCAGCGAAAATTAAACGCTGTTGATCCGGCGGTATTCCCTCTTTGTCTTGAATCTTC 5069 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 ||| | ||| | |||||| |||| ||| ||||| || || | |||||| || || Sbjct 5070 GCTTTCACATTTTCAATGGTGTCCGAAGCCTCAACTTCAAGCGTTATCGTTTTCCCAGTA 5129 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 || || || || ||||||||||| Sbjct 5130 AGGGTCTTAACGAAAATTTGCAT 5152 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || ||||| | || | || |||||||| ||||| || ||||| ||||| ||||||||| Sbjct 6227 TTACCTGCAAAAATAAGACGCTGCTGGTCGGGCGGGATCCCTTCCTTATCCTGAATTTTT 6286 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 ||| | ||| | ||||||||| | || || || || || | ||||| || || Sbjct 6287 GCTTTCACGTTTTCGATGGTGTCGGACGCTTCAACCTCAAGCGTGATGGTTTTACCCGTA 6346 Query 45318 AGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 || ||||| || ||||||||||| ||| || Sbjct 6347 AGGGTTTTGACGAAAATTTGCATTCCGCCAC 6377 >seq2949 Length=15852 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 45201 CCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 45260 ||||| | || || || ||||| ||||| || |||||||| || || ||||| || | Sbjct 11470 CCTGCAAAAATTAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGAATCTTCGCT 11411 Query 45261 TTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGA 45320 || | ||| | ||||| |||| ||| || || | || | |||||||| || || Sbjct 11410 TTCACATTTTCAATTGTGTCCGAAGCCTCCACCTCTAAGGTGATTGTTTTGCCAGTAAGG 11351 Query 45321 GTTTTTACAAAAATTTGCATC 45341 |||||||||||||| |||||| Sbjct 11350 GTTTTTACAAAAATCTGCATC 11330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451891148406720