Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq328 140 1e-27 seq2430 123 1e-22 seq267 123 1e-22 seq1516 113 2e-19 seq1143 104 9e-17 seq285 102 3e-16 >seq328 Length=47871 Score = 140 bits (154), Expect = 1e-27 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 451226 GAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAA 451285 || || ||||| |||||||||||||||||||| |||||||| | |||||||| || Sbjct 29504 GACACGAAAACATTTGCTCCTGAAGAAATTTCTGCTATGGTTTTGGGAAAAATGAAGGAG 29445 Query 451286 ACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTAT 451345 | || || ||| ||||| | | |||| || | ||||| || ||||| Sbjct 29444 ATTGCGGAGTCGTATCTTGGTAAAGAGATCAAACATGCGGTCGTCACTGTACCAGCTTAC 29385 Query 451346 TTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTT 451405 |||||||||||||| ||||||| || |||||||| || |||||||||| | ||||| Sbjct 29384 TTCAATGATGCACAGAGGCAAGCGACAAAAGATGCTGGCACTATTGCTGGTCTTAATGTA 29325 Query 451406 CTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 | || ||||| |||||||| ||||| || ||| | || ||||| || Sbjct 29324 GTGCGTATTATCAATGAACCAACAGCGGCAGCTATTGCTTATGGCCT 29278 Score = 98.7 bits (108), Expect = 4e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 451481 aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAA 451540 |||||| | |||||||| | ||||| || ||| |||| ||| | || ||||||| Sbjct 29152 AATATTCTTGTATTTGACCTCGGTGGTGGTACTTTTGATGTTTCAATGCTCACAATTGAT 29093 Query 451541 GATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATT 451600 |||| || || |||||| ||||||||||||||| |||||||| || ||||||||| || Sbjct 29092 AATGGAGTTTTCGAAGTACTGGCAACCAATGGTGACACTCATCTTGGCGGTGAAGATTTT 29033 Query 451601 GA 451602 || Sbjct 29032 GA 29031 Score = 86.0 bits (94), Expect = 2e-11 Identities = 161/237 (68%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 |||||||||||||||||||||||||||||||| || || || | | | | ||| Sbjct 28329 AATCCTGATGAAGCTGTTGCATATGGTGCTGCCGTACAGGCTGGTGTGAT------TTCT 28276 Query 452051 GATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTT 452110 | || |||||| | ||||| || | | || |||| || | | ||||| || Sbjct 28275 GGAGAAGAAAAAGCAAATGATATCGTGCTTCTTGACGTAAATCCGTTGACGCTTGGCATT 28216 Query 452111 GAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAA 452170 ||||||| ||||||| | ||||| || | ||||| || || |||||| || Sbjct 28215 GAAACAGTTGGTGGAGTAATGACCAAACTGATTAACCGTAATACCGTTATTCCGACGAAG 28156 Query 452171 AAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTG 452227 ||||| |||| ||| || ||| |||||||| || ||| || ||||| ||| Sbjct 28155 AAGAGCCAAATATTCTCAACTGCAGCAGATAACCAGCCCACTGTGACGATTCAGGTG 28099 >seq2430 Length=18656 Score = 123 bits (136), Expect = 1e-22 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||||||||| || || || |||||||| || || || ||||| | ||| Sbjct 5467 ATGCAGATTTTCGTTAAAACTCTTACCGGGAAAACTATAACGCTCGAAGTTGAGGCGTCT 5408 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | ||||| || ||||| || |||||||| |||||||| |||||| Sbjct 5407 GATACGATTGAGAATGTTAAAGCGAAGATTCAGGACAAGGAAGGGATTCCTCCGGATCAA 5348 Query 391170 CAACGTTTAATTTTCTCAGGGAA 391192 ||||||||||||||| | || || Sbjct 5347 CAACGTTTAATTTTCGCTGGTAA 5325 Score = 105 bits (116), Expect = 3e-17 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || || ||||| ||||| || || ||||| ||||| | || Sbjct 5152 ATGCAAATTTTCGTTAAGACCCTTACTGGGAAAACGATAACGCTTGAAGTTGAGGCTTCG 5093 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||||| | | ||| || |||||||| || || ||||| || || |||||| Sbjct 5092 GACACCATTGAAAATGTGAAAGCGAAGATTCAAGACAAAGAGGGAATACCGCCGGATCAA 5033 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTG 391200 || |||||||||||| | || || | |||| Sbjct 5032 CAGCGTTTAATTTTCGCTGGTAAGCTTCTTG 5002 Score = 98.7 bits (108), Expect = 4e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| || || |||||||| || || ||||| |||||| | || Sbjct 6370 AATGCAAATTTTCGTCAAAACCCTTACGGGTAAAACCATCACGCTTGAGGTTGAAGCGTC 6311 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||| ||| | ||| ||||||||| ||||||||||| || || || || || Sbjct 6310 CGACACCATCGAAAACGTGAAAGCAAAAATTCAGGATAAGGAAGGGATCCCGCCCGACCA 6251 Query 391169 ACAACGTTTAATTTTCTCAGGGAA 391192 || ||| | ||||| |||| || Sbjct 6250 GCAGCGTCTTATTTTTGCAGGTAA 6227 Score = 95.1 bits (104), Expect = 5e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || ||||| || || ||||| ||||| ||||||||||| || || | || Sbjct 6062 AATGCAGATCTTTGTTAAGACCCTTACTGGAAAAACAATTACTCTTGAAGTAGAGGCTTC 6003 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | | ||| ||||| || || || || ||||||||||| ||||| Sbjct 6002 AGACACAATTGAGAATGTCAAAGCCAAAATCCAGGACAAAGAGGGAATTCCTCCAGATCA 5943 Query 391169 ACAACGTTTAATTTT 391183 |||||| |||||||| Sbjct 5942 ACAACGATTAATTTT 5928 Score = 95.1 bits (104), Expect = 5e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| || ||||| ||||| || ||| | || || ||| | || Sbjct 6824 ATGCAAATCTTTGTCAAAACTCTTACTGGCAAAACAATCACTTTGGAAGTCGAAGCTTCC 6765 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | ||| ||||||||| ||||||||||||||||| || |||||| Sbjct 6764 GACACAATTGAGAATGTGAAAGCAAAAATTCAGGATAAGGAAGGAATTCCACCCGATCAA 6705 Query 391170 CAACGTTTAATTTTCTCAGG 391189 || ||| | ||||| |||| Sbjct 6704 CAGCGTCTTATTTTTGCAGG 6685 >seq267 Length=51418 Score = 123 bits (136), Expect = 1e-22 Identities = 188/262 (72%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 452315 CCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTT 452374 |||||||||||| | |||| |||| ||||||| ||||| ||| | ||||| ||| Sbjct 27903 CCTCAAATTGAAGTCACCTTTGATATTGATGCGAATGGCATTTTGAATGTCTCGGCACAA 27844 Query 452375 GAAAAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAACCGTTTATC 452433 || || ||| | || ||| || || ||||| || ||||| |||||||| || | || Sbjct 27843 GACAAGTCAACAGGCAAA-CATAACAAAATCACCATTACAAATGATAAGGGTCGGCTGTC 27785 Query 452434 TAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAACA 452493 || || ||||||||||||||||| | ||||| || || | ||||| ||||||||| Sbjct 27784 AAAGGATGATATTGAAAAAATGGTTCAAGAAGCCGAGAAGTACAAGGCCGATGATGAAGC 27725 Query 452494 AGTTAGAAAACATGTTGAAGCTAAAAACAAACTAGAAGGATATTGTTATCAA-ATGAAAC 452552 | ||| ||| || | || || |||| || |||| ||| | |||| ||||| | Sbjct 27724 ACAGAGAGAACGAGTGGCTGCAAAGAACAGTCTCGAAGCATA-CGCGTTCAATATGAAGC 27666 Query 452553 AAACTGTATTTGGTGATGAAAA 452574 ||||| ||| ||||||||| Sbjct 27665 AAACT---ATTGATGATGAAAA 27647 Score = 111 bits (122), Expect = 6e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 ||||||| || || ||||||||||| |||| || || || || ||||||||||| | Sbjct 29401 TTACTGTGCCAGCATATTTCAATGACTCACAGCGTCAGGCTACAAAAGATGCAGGTGCAA 29342 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 |||| || ||||| ||||||||||| || |||||||||||||| || ||| | || |||| Sbjct 29341 TTGCAGGATTAAACGTTCTTCGAATCATCAATGAACCTACAGCTGCAGCTATTGCGTATG 29282 Query 451449 GACT 451452 | || Sbjct 29281 GGCT 29278 >seq1516 Length=25419 Score = 113 bits (124), Expect = 2e-19 Identities = 325/494 (66%), Gaps = 12/494 (2%) Strand=Plus/Plus Query 452003 GCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAA 452059 ||||| || ||||| || ||||||||||||||||| || | || ||| | ||| Sbjct 7438 GCTGTGGCTTATGGCGCAGCAGTTCAAGCAGCTATCCTTTCTGG---AGACAAGTCTGAG 7494 Query 452060 AAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCT 452119 | || |||| | || | | |||||| | || || ||| | || ||||||| ||| Sbjct 7495 ACCGTACAAGATCTGCTTCTGCTTGATGTAGCTCCGCTTTCTTTGGGTATTGAAACTGCT 7554 Query 452120 GGTGGAATGATGACTAATTTAATTAAACGAGGA--ACTTCTATTCCTTGTAAAAAGAGTC 452177 || ||| ||||||| ||| || || ||||| || | || || |||| || Sbjct 7555 GGCGGAGTGATGACGTCTTTGATCAA--GAGGAACACAACAATCCCAACGAAAACTTCTC 7612 Query 452178 AAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAG 452237 | ||||||| |||| ||| ||||| || || || ||||| || | || || | Sbjct 7613 AGACATTTACTACATACTCTGACAACCAGCCTGGAGTGTTGATTCAGGTTTACGAGGGTG 7672 Query 452238 AACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTC 452297 ||||||| |||||| ||||||||| || || | || | || || || | Sbjct 7673 AACGTGCTATGACAAAGGATAATAATCTTCTTGGCAAGTTCGAATTATCCGGTATCCCAC 7732 Query 452298 CTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTC 452357 | || ||||| || || || ||| |||| | |||| ||||||| ||||| || Sbjct 7733 CAGCTCCGAGGGGTGTACCGCAGATAGAAGTTACGTTTGATATTGATGCCAATGGCATCT 7792 Query 452358 TTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAAT 452416 | ||||| | |||| || || || |||| ||| || || || || || ||||| ||| Sbjct 7793 TGAATGTTACTGCACAGGACAAGTCGACTGGCAAA-CATAACAAGATAACGATTACAAAT 7851 Query 452417 GATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTC 452476 || || || | ||||| || || ||||| ||||| | || || || || | Sbjct 7852 GACAAGGGTCGCCTTTCTAAGGATGAAATTGATCGGATGGTTCAAGAGGCCGAGAAGTAT 7911 Query 452477 AAGGATGATGATGA 452490 |||| |||||||| Sbjct 7912 AAGGCAGATGATGA 7925 >seq1143 Length=29297 Score = 104 bits (114), Expect = 9e-17 Identities = 170/241 (71%), Gaps = 13/241 (5%) Strand=Plus/Plus Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 || || |||||||| || || ||||| || | ||||| |||||| ||||||||||||| Sbjct 21469 GCCACAAAAGATGCCGGCCAGATTGCAGGACTTAATGTCCTTCGAGTTATTAATGAACCA 21528 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATT 451486 || || || ||||| | ||||| | ||| | || ||||||| ||| ||| Sbjct 21529 ACTGCTGCCGCTCTGTCCTATGGTAT-GGATA--------AAGCAGAAGATAAAGTAATT 21579 Query 451487 TTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTT-CAATTGAAGATGG 451545 |||| ||| ||||||| || ||| ||||| ||| | ||| | | ||| || Sbjct 21580 GCTGTATACGATCTTGGTGGTGGGACTTTTGATA--TCTCAATTTTGGAGATCCAGAAGG 21637 Query 451546 G-GTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604 | || |||||||||||| | || ||||| |||||| | | || || |||||| | |||| Sbjct 21638 GTGTGTTTGAAGTAAAGTCGACTAATGGCGATACTTTTTTGGGCGGAGAAGATTTCGATA 21697 Query 451605 A 451605 | Sbjct 21698 A 21698 >seq285 Length=50150 Score = 102 bits (112), Expect = 3e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| |||||||||| || ||||||||||| |||||| | || Sbjct 46265 AATGCAAATTTTCGTGAAAACTTTGACTGGTAAGACCATTACTCTTGAAGTTGAAGCTTC 46324 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || || | || |||||| ||||||||||| || |||||||| ||||| Sbjct 46325 GGACACTATAGAGAACGTGAAGGCAAAAATCCAAGATAAGGAGGGTATTCCTCCCGATCA 46384 Query 391169 ACAACGTTTAATTTTCTCAGG 391189 || || || ||||| |||| Sbjct 46385 GCAGCGATTGATTTTTGCAGG 46405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975216374893856