Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq8026 156 1e-33 seq15822 136 1e-27 >seq8026 Length=4067 Score = 156 bits (172), Expect = 1e-33 Identities = 146/186 (78%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 30654 TTCGAGCCGGGCAGCGTGTTCCAGCTCATGCGACCGGACATCAACCAGGAGGTGTACGGC 30713 |||| ||| ||| |||||| || || || ||||| || || |||||| |||||||| Sbjct 566 TTCGCGCCCGGCTCCGTGTTTCACCTGCTGGAGCCGGATATTAATCAGGAGCTGTACGGC 625 Query 30714 CTGCCCGAATATCTCAGCTCGCTTCACTCGGCCTGGCTGAACGAGTCGTCGACGCTGTTC 30773 ||||| |||||||||||| | ||| |||| ||||||||||| ||||| | ||||||||| Sbjct 626 CTGCCGGAATATCTCAGCGCCCTTAACTCTGCCTGGCTGAATGAGTCAGCCACGCTGTTC 685 Query 30774 CGGCGGAAGTATTACGAAAACGGTAGCCACGCCGGCTTCATCCTCTACATGACCGACGCG 30833 || || ||||||||||||||||| || ||||| | |||| | ||| | ||||| || Sbjct 686 CGCCGCAAGTATTACGAAAACGGCGCTCATGCCGGATACATCATGTACGTTACCGATGCC 745 Query 30834 GCGCAG 30839 | |||| Sbjct 746 GTGCAG 751 >seq15822 Length=778 Score = 136 bits (150), Expect = 1e-27 Identities = 439/672 (65%), Gaps = 31/672 (5%) Strand=Plus/Plus Query 28644 CGGCGCGGACTACAAGGAAATCGACCTGCTCGGCCGACAGATCGAGCGGCTCGCGCGCGT 28703 ||||| |||| ||||||||| |||||||| || || ||||| || || || || || || Sbjct 41 CGGCGGTGACTTCAAGGAAATTGACCTGCTGGGACGCCAGATTGAACGACTGGCACGGGT 100 Query 28704 GCAGAAATACGGGGAGACGGGGAAGGAAGGCGACCTGAACCCGAACATTGCCGCGCGCAA 28763 | ||| | |||| || || || | ||||| || |||||| | || ||||| Sbjct 101 AAATCGCTACAGCCAGACCGGCAACGAGGCAGACCTTAATCCGAACGTCGCTAACCGCAA 160 Query 28764 T---GCCGGGCCGAAGCGCAAGCCGCCGAAAAACGAAAT----CAGCGAGGAA--CAG-G 28813 | ||||| | ||||| ||| |||| ||| | ||| || || || | Sbjct 161 CAAAGGCGGGCGG---CGCAAACCG----AAAAAGAATTTTTTCAGTGACGAGGCCATCG 213 Query 28814 AAGAGCGGATCGTGAAGGCGTTCCGCGAATCACTGTT-CGACTACCAGAAGGTCTGGTAT 28872 || ||| | | | || ||| || || | || |||||| ||| | ||||||| Sbjct 214 AAAAGCTG---GAGCAGATTTTCTTTGAG-CAGTCTTTCGACTATCAGTTGCACTGGTAT 269 Query 28873 CGAAACGGCGATCAGCAG---ACGCGCAATATCCTGAAGTCACGGCAGATCGGCGCCACC 28929 || ||| | |||| | ||| |||||||||| || || ||||| ||||| || Sbjct 270 CGCGCCGGGCTTGAGCACCGCATCCGCGATATCCTGAAATCCCGCCAGATTGGCGCAACG 329 Query 28930 TGGTATTTCGCACGCGAGGCATTCGTCGACGCGCTCGATACCGGCCGCAACCAGATTTTT 28989 | ||||| | |||||||| | | ||| || | ||||| | |||||||||||| Sbjct 330 TTTTATTTTTCCCGCGAGGCGCTGCTGCGCGCCCTGAAAACCGGTCATAACCAGATTTTT 389 Query 28990 CTATCGGCCAGCAAAGCACAGGCGCACGTCTTCAAACAGTACATCGTGCAGTTCGCTCGT 29049 || |||||||| ||| | |||||| | || ||| | |||||| | || || | Sbjct 390 CTGTCGGCCAGTAAAACGCAGGCGTATGTGTTCCGCGAATACATCATCGCCTTTGCCC-- 447 Query 29050 GACGTGGCCGACGTTGAGCTGACGGGCGATCCGATCATTCTG---CCGAACGGTGCGACG 29106 | ||| |||||||| || || || || ||||| | ||| ||||| || | Sbjct 448 -ATCTGGTTGACGTTGACCTTACCGGTGACCCGATTGTCCTGGGCAATAACGGCGCAAAA 506 Query 29107 CTGTACTTCCTAGGGACGAACTCGCGCACCGCGCAGTCGTATCACGGCAATCTGTACTTC 29166 ||| || || || || ||||| |||||||||| || ||||| | |||||| || Sbjct 507 CTGATTTTTCTCGGCACCAACTCCAACACCGCGCAGAGCCATAACGGCGACCTGTACGTC 566 Query 29167 GACGAATATTTCTGGGTGCCGAAGTTCCGCGAGCTGAATACCGTTGCGTCGGGCATGGCG 29226 ||||| ||||||| | ||||| || | | ||| || || || || || ||||| Sbjct 567 GACGAGATTTTCTGGATCCCGAATTTTCAGGTACTGCGTAAGGTGGCATCAGGTATGGCC 626 Query 29227 ATGCACAAACGCTGGCGGCTGACCTACTTCAGCACGCCGTCGAGTACGACCCATGAAGCC 29286 || | | | ||| |||||| ||| ||| ||||| | | | || || ||| Sbjct 627 TCACAGAGTCACCTGCGCTCGACCTATTTCTCCACCCCGTCCACGCTGGCGCACGACGCC 686 Query 29287 TACGCGTTCTGG 29298 ||| |||||||| Sbjct 687 TACCCGTTCTGG 698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129623865740528