Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq285 131 4e-25 seq2430 105 1e-17 >seq285 Length=50150 Score = 131 bits (144), Expect = 4e-25 Identities = 117/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055 ||| |||||| || || | ||| || || || |||||||| || || || ||||| |||| Sbjct 46410 GCTAACCTGCAAAAATCAATCGCTGCTGATCGGGAGGAATACCCTCCTTATCTTGGATTT 46351 Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115 || ||| |||||||| || ||||||||| ||| |||||||| |||| ||||| || | Sbjct 46350 TTGCCTTCACGTTCTCTATAGTGTCCGAAGCTTCAACTTCAAGAGTAATGGTCTTACCAG 46291 Query 195116 TCAAAGTTTTTACGAACACTTGCATTT 195142 |||||||||| ||||| | |||||||| Sbjct 46290 TCAAAGTTTTCACGAAAATTTGCATTT 46264 >seq2430 Length=18656 Score = 105 bits (116), Expect = 1e-17 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 194994 CTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAAT 195053 || |||||| || || || | ||||||||| ||||||||||| || |||||||| || || Sbjct 5915 CTTCTTACCAGCAAAAATTAATCGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTGGAT 5974 Query 195054 TTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCC 195113 ||| ||||| |||||||| ||||| ||| || |||||||| |||| || ||||| Sbjct 5975 TTTGGCTTTGACATTCTCAATTGTGTCTGAAGCCTCTACTTCAAGAGTAATTGTTTTTCC 6034 Query 195114 TGTCAAAGTTTTTACGAACACTTGCATT 195141 || | || || || || | |||||| Sbjct 6035 AGTAAGGGTCTTAACAAAGATCTGCATT 6062 Score = 95.1 bits (104), Expect = 3e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055 ||||||| ||||| || | || ||||| || || || || || |||||||||||||| | Sbjct 5008 GCTTACCAGCGAAAATTAAACGCTGTTGATCCGGCGGTATTCCCTCTTTGTCTTGAATCT 5067 Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115 | || || || ||||||||||||||| || |||||||| || | ||| || || | Sbjct 5068 TCGCTTTCACATTTTCAATGGTGTCCGAAGCCTCAACTTCAAGCGTTATCGTTTTCCCAG 5127 Query 195116 TCAAAGTTTTTACGAACACTTGCAT 195140 | | || || ||||| | |||||| Sbjct 5128 TAAGGGTCTTAACGAAAATTTGCAT 5152 Score = 91.5 bits (100), Expect = 3e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || || || | || ||||| || |||||||| ||||||||||| |||||||| Sbjct 5621 CTTACCAGCAAAAATCAAACGCTGTTGATCCGGAGGAATCCCTTCTTTGTCCTGAATTTT 5680 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||||| || ||||| ||||| || || |||||||| || | || || || || Sbjct 5681 TGCTTTGACATTTTCAATCGTGTCAGACGCCTCAACTTCAAGAGTTATGGTTTTGCCAGT 5740 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 | ||||| || || | |||||| Sbjct 5741 AAGCGTTTTCACAAAAATCTGCATT 5765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109199683499144