Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq12 91.5 2e-13 seq2833 82.4 9e-11 >seq12 Length=107902 Score = 91.5 bits (100), Expect = 2e-13 Identities = 171/246 (70%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 48108 TATTTAGTATATAACTTCTCAAATTCATC--CCCATACACATTATCTAACCCAGGACATT 48165 || || || ||||| ||||| || || || ||||| || | || | ||||||||||| Sbjct 19533 TACTTGGTGTATAATTTCTCGAACTCTTCTCCCCATG-ACTGT-TCGAGCCCAGGACATT 19476 Query 48166 CATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTG 48225 | ||| ||||| | |||||| | ||| | ||| |||| ||||||| | ||| | Sbjct 19475 CTGCAGGGCACATAAGTGACCATTTTCCATTTTCTTTAACTCGCCTCATAAAAAGATCGG 19416 Query 48226 GTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTT 48285 | | |||||| || | | | || || ||| | |||| |||| ||| ||| Sbjct 19415 GAACCCAAAGTGCAAAATTGAGCTCTCTGCATCTCTCTAGCTCATCGCCAACCTTCTTTT 19356 Query 48286 TAAGTTCAAGAAAGTC--CATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTAC 48343 | ||||| ||||||| ||||| ||| |||||||||||||| | || ||||||| | | Sbjct 19355 TCAGTTC--GAAAGTCTGCATTACATCCGCATGCCATGGTTCAAGGTAGATTGCCACTGC 19298 Query 48344 ACCTGG 48349 ||| || Sbjct 19297 ACCAGG 19292 >seq2833 Length=16420 Score = 82.4 bits (90), Expect = 9e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 48116 ATATAACTTCTCAAATTCATC-CCCATACACATTATCTAACCCAGGACATTCATTAGGAC 48174 ||||||||| ||||| || || ||| ||| || | | || || |||||| || | Sbjct 2137 ATATAACTTTTCAAACTCTTCTCCCCAACA-ATCCTGAAGACCTTGAGATTCATACGGGC 2079 Query 48175 ACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAA 48234 |||| | ||||||| || | |||| |||| ||| || | ||| || ||||| | Sbjct 2078 ACATAAGTGACCAAATTTCGTTCTTTTCAACTCGCCGCATGAACAAATCAGGAATCCATA 2019 Query 48235 GAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAA 48294 ||| | |||||||||||||| || ||| ||| |||| ||| || | | ||| | Sbjct 2018 AAGCAAAAAATAAATCCCTAGCTCGCTCTTCCTCACTGCCCACATTTTTTCTCAATTCCA 1959 Query 48295 GAAAGTCCATTATATCAGCATGCCATGGTTCTAAATA 48331 || | || | ||| || | |||||| ||||| ||||| Sbjct 1958 GATAATCAAATATGTCTGAATGCCACGGTTCCAAATA 1922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561969453228480