Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq15822 313 5e-81 seq8026 269 6e-68 seq11968 159 8e-35 >seq15822 Length=778 Score = 313 bits (346), Expect = 5e-81 Identities = 508/725 (70%), Gaps = 21/725 (3%) Strand=Plus/Minus Query 13634 TGGCACGGCCCCGGTTAAACAGCGCACCGGACCAGAACGGATAAGCACTGTGGGTCAGGC 13693 |||| || |||||||||||||| |||| ||||||||||| || || ||| | ||| Sbjct 729 TGGCGCGTCCCCGGTTAAACAGTTCACCCGACCAGAACGGGTAGGCGTCGTGCGCCAGCG 670 Query 13694 TGGAGGGCGTGGAAAAATAGGTTTGTCGCCATTT--TTTGTGAATGGCCATACCGGAAGC 13751 |||| || ||||| |||||||| ||| | | ||||| ||||||||| || || Sbjct 669 TGGACGGGGTGGAGAAATAGGTCGAGCGCAGGTGACTCTGTGA--GGCCATACCTGATGC 612 Query 13752 CACTTTGCGCAGTTCCTGGAATTTTGGTATCCAGAAATATTCATCCAGGTACAGATTACC 13811 ||| || |||||| |||| || || || ||||||||| || || | |||||| | || Sbjct 611 CACCTTACGCAGTACCTGAAAATTCGGGATCCAGAAAATCTCGTCGACGTACAGGTCGCC 552 Query 13812 GTGATAGCTCTGCGCCGTGCGGGCGTTGGTGCCGAGAAAGTACAAAGCGGCCCC---ATT 13868 || || ||||||||| ||| || ||||||||||||||| || || || ||| Sbjct 551 GTTATGGCTCTGCGCGGTGTTGGAGTTGGTGCCGAGAAAAATCAGTTTTGCGCCGTTATT 492 Query 13869 GGGTAACACCATGGGATCGCCTTTCAGCTCAACATCCACCTCTTTTGCAAAGTCGATGAT 13928 | | || || || || || | || ||||| || ||| | |||||| ||||||| Sbjct 491 GCCCAGGACAATCGGGTCACCGGTAAGGTCAACGTCAACCAGATGGGCAAAGGCGATGAT 432 Query 13929 GTACTGCTTAAAGACGTGCGCCTGTGCCTTACTGGCAGAAAGGAAAATCTGGTTGCGTCC 13988 ||| | || || | |||||| | |||||||| || || ||||||||||| | || Sbjct 431 GTATTCGCGGAACACATACGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTATGACC 372 Query 13989 GGTCAGCAGGGCGTCAATCAATGCTTCACGGGCAAAATAAAACGTGGCGCCAATCTGGCG 14048 ||| ||||||| | || || || |||| |||||||||||| |||||||||||||| Sbjct 371 GGTTTTCAGGGCGCGCAGCAGCGCCTCGCGGGAAAAATAAAACGTTGCGCCAATCTGGCG 312 Query 14049 CGACTTGAGCAGGTTGCGGATGCGGTTTGTTTTCCCGGCTTCAAACCAGTGACGCTGATA 14108 || || || | | ||||||||||| |||||| | ||||||| |||||| Sbjct 311 GGATTTCAGGATATCGCGGATGCGGTGCTCAAGCCCGGCGCGATACCAGTGCAACTGATA 252 Query 14109 GTCGAACATAGAGGCGTGGAAG-ACTTCT--TCCAGCTTTTCGATCTGTTCATCAGTGAA 14165 |||||| ||| | ||| | ||| |||||||||||||| || ||| |||| Sbjct 251 GTCGAA---AGACTGCTCAAAGAAAATCTGCTCCAGCTTTTCGATGGCCTCGTCACTGAA 195 Query 14166 AACATTCTTTTCCGGCTGACGGCGTGGGCCTTTGTTGCGGTTGGCGACGTTAGGGTTTAA 14225 || |||||||| ||| | || || ||||||||||||||| |||||||| || || | Sbjct 194 AAAATTCTTTTTCGGTTTGCGCCGCCCGCCTTTGTTGCGGTTAGCGACGTTCGGATTAAG 135 Query 14226 GTCGGCTTCGTTGCCACCATTGTTAAACTTGCCGAT----CCGCGCGTGGCGCTCCGACT 14281 ||| || |||||||| | | | | |||| ||| || | || || || Sbjct 134 GTCTGCCTCGTTGCCGGTCTGGCT----GTAGCGATTTACCCGTGCCAGTCGTTCAATCT 79 Query 14282 GGCGCGCCAGCAGGTCAATTTCTTTGAAATCTTTCCCTTCTTTATGCTCCTTCATAATGA 14341 |||| |||||||||||||||| ||||| || || ||| ||| || || |||| Sbjct 78 GGCGTCCCAGCAGGTCAATTTCCTTGAAGTCACCGCCGGTTTTCTGCGGTTTGATGATGA 19 Query 14342 GCTGG 14346 ||||| Sbjct 18 GCTGG 14 >seq8026 Length=4067 Score = 269 bits (298), Expect = 6e-68 Identities = 426/597 (71%), Gaps = 30/597 (5%) Strand=Plus/Minus Query 12121 CTGCGCGGCGTCAGTCATGTACATGATGAAGCCTGCGTGGCTACCGTTAATGTAGTACTT 12180 |||| |||| || || | |||||||||| | || || || ||||| ||| ||||| Sbjct 751 CTGCACGGCATCGGTAACGTACATGATGTATCCGGCATGAGCGCCGTTTTCGTAATACTT 692 Query 12181 CCGGCGGAACAGTGTTGCGGACTCATTCAGCAGGGCGGA----AGGGATAGCTGACAGAT 12236 ||||||||||| || || |||||||||||| ||| || |||| ||||| ||| Sbjct 691 GCGGCGGAACAGCGTGGCTGACTCATTCAGCCAGGCAGAGTTAAGGGC--GCTGA--GAT 636 Query 12237 ATTCCGGCAGACCGTAAATCTCCTGGTTTAAATCCGGCTCCATCAGGTGAAAGATGCTGC 12296 |||||||||| ||||| | |||||| || | ||||||||||| ||||||||| | | || Sbjct 635 ATTCCGGCAGGCCGTACAGCTCCTGATTAATATCCGGCTCCAGCAGGTGAAACACGGAGC 576 Query 12297 CTTTGGTGAACTCGTAGGGGGGCG--TGGTT--AGGCCGTATTGCACAAACCAGTAGGTG 12352 | || | || ||| | || | ||| ||| || |||| ||||||| Sbjct 575 CG--GGCG----CGAAGGCTGTCGGCTCGTTGAAGGACG----GCACCCACCAGTAAACA 526 Query 12353 TCTAAATCGATCCCGCGGCGGGTGTATTTCGCCAGTGATGGCTCCAGCGACAGAATGCCG 12412 || || | || |||||||| ||||| ||| |||| | ||||| | || || Sbjct 525 TCCTCCTCCACGCCACGGCGGGTATATTTTGCCGGTGAGGTTTCCAGT--CTGATGACCT 468 Query 12413 --CCGAGTCG-GTTGGTGCGCTTCTCCAGATAGGCATTACCGAATACCAGATAGTCCTGC 12469 ||| || | | || ||||| |||||| | ||||||||||| |||||| | ||| || Sbjct 467 TACCG-GTGGTGCTGTAACGCTTTTCCAGAAACGCATTACCGAACACCAGAAAATCCAGC 409 Query 12470 ACAAACCGGCTGAACGCCTGCTGGCTAAGAAGTGGATGCGGGATAAAGGTGCTGGTCAGA 12529 ||||| |||||||| |||||||| || || ||||||||||| || | |||| Sbjct 408 ACAAAGCGGCTGAAATCCTGCTGGGACAGCCACGGGTGCGGGATAAACGTTGAAGCCAGA 349 Query 12530 ATGTTGCGTTTTACCGCAATGGGAGAGCTGTGATGCACTGCGGCACGGTAGGTTCGCGCC 12589 || |||||||| || ||| || |||||||||||||| || ||||| | || ||| Sbjct 348 ATATTGCGTTTGACGTAAATCGGTGAGCTGTGATGCACGGCAGCACGCAGGCTTTTTGCC 289 Query 12590 AGCCCGTCAAAGCTGACCGGCGGCTCATACCAGCGGTCCAT-CTGCACGCATTCCACATA 12648 || ||| |||||||||||| ||||||||||| | | | | ||| | ||| || || || Sbjct 288 AGACCGGTAAAGCTGACCGGTGGCTCATACCATCTGCCGTTACTG-ATGCACTCGACGTA 230 Query 12649 GTCCAGCAGCTCGCGGCGGTCCAGCACCGGGATTGGATCACCAAAGCTGAAAGCCTC 12705 ||||| | || |||||||| || ||||| | || ||||||||| |||| ||||| Sbjct 229 ATCCAGAATGTCACGGCGGTCGAGTACCGGCACCGGTTCACCAAAGGTGAATGCCTC 173 >seq11968 Length=1601 Score = 159 bits (176), Expect = 8e-35 Identities = 205/283 (72%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 32663 CCGCCTGATGAGTCTGACACTGACGGATAACCGGGGCTTTGAAGCGGACCAGCTTGATCT 32722 ||| |||||||| |||| ||||||||||||||||||||||| || |||||||||||| | Sbjct 498 CCGTCTGATGAGCATGACCCTGACGGATAACCGGGGCTTTGAGGCTGACCAGCTTGATAT 439 Query 32723 GGAGCTGGACGACGCCGACGGGCTGATCGCCCTGCCGCGACGTGGGGCTGTGATTCAGCT 32782 || ||| |||| |||||||||| | ||| |||||| ||||| ||||| | | | Sbjct 438 TGAACTGAACGATGCCGACGGGCAGGTCGGGCTGCCGGTTCGTGGCGCTGTCCTGACGGT 379 Query 32783 GGCGCTGGGCTGGAAAGGCCAGCCGCTTTTCCCTAAAGGGGCTTTTACCGTAGATGAAAT 32842 | | ||||||||||| | || | |||||| |||||||| ||||| | Sbjct 378 GTATATCGGCTGGAAAGGTTTTGCCCTGGTATGCAAAGGGAAATTTACCGTTGATGAGGT 319 Query 32843 TGAACACAGCGGTGCCCCTGACCGGCTGACCATCAGGGCGCGTAGCGCAGATTTCCGTGA 32902 ||||||| | || || || || | | |||||| | || || || |||||||| || | Sbjct 318 TGAACACCGGGGCGCGCCGGATGTGGTTACCATCCGCGCCCGGAGTGCAGATTTTCGCGG 259 Query 32903 AACCCTCAATACACGGCGCGAAAAATCATGGCATCAGACAACG 32945 || |||||| | || || ||| ||||||||| | || ||| Sbjct 258 GACGCTCAATTCCCGCCGGGAAGGCTCATGGCATGACACCACG 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109027117520336