Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq8026 535 8e-148 seq15822 367 2e-97 seq11968 205 2e-48 >seq8026 Length=4067 Score = 535 bits (592), Expect = 8e-148 Identities = 692/949 (73%), Gaps = 20/949 (2%) Strand=Plus/Plus Query 12135 GCCACGCCGACGTCGCCTGGGCAATCATGCACGCCCTGCTTAACGAACCGCTGACCGCCG 12194 ||||||||||| |||||||||| | ||||||||||||| | || || || || ||||| | Sbjct 1 GCCACGCCGACCTCGCCTGGGCGACCATGCACGCCCTGTTAAATGAGCCACTCACCGCGG 60 Query 12195 CCAGCGGCGG--CGCTAACC-CTTCAATTCTGGAATTTTACTGATGAGCAA--ACGCAGG 12249 | | || |||| || | | |||||||| |||||||||||||||| | ||| Sbjct 61 GTATCAGCACTCCGCTGACATCCACCATTCTGGAGTTTTACTGATGAGCAAGAAAAAAGG 120 Query 12250 GGCCGTAAGGCTTTCAACG-CAAAAACGCAGCCCGTACCGGCCGCCGCACCGCAGCAGCA 12308 | | || || || |||||| | ||| || ||| ||| | | | Sbjct 121 GAAAACACCGCGACCAGCGGCAAAAAAAATGACCG------CCAGCGCCCCGAAAATGGA 174 Query 12309 GGCGGAAGCGTTCACCTTTGGCGAGCCGACGCCGGTTATGGACAAGCGCGATATCCTGGA 12368 ||| ||||||||||| || ||| |||||| | ||| || || || ||||| Sbjct 175 GGCA------TTCACCTTTGGTGAACCGGTGCCGGTACTCGACCGCCGTGACATTCTGGA 228 Query 12369 TTATGCCGAGTGCATCGGTAACGGGCGCTGGTATGAGCCGCCGGTCAGCTTTCACGGGCT 12428 ||| | |||||||||| ||||||| | ||||||||||| |||||||||||| ||| || Sbjct 229 TTACGTCGAGTGCATCAGTAACGGCAGATGGTATGAGCCACCGGTCAGCTTTACCGGTCT 288 Query 12429 GGCGAAAAGCCTGCGAGCGGCGGTGCATCACAGCTCGCCGATTTATGTGAAGCGAAACAT 12488 ||| ||||||||||| || || |||||||||||||| |||||||| || || || || || Sbjct 289 GGCAAAAAGCCTGCGTGCTGCCGTGCATCACAGCTCACCGATTTACGTCAAACGCAATAT 348 Query 12489 ACTGGCGTCCACTTTTGTGCCGCACCCGATGATGAGCCAGCAGGAGTTCAGCAAGTTTGC 12548 ||||| || || ||| | ||||||||| | || ||||||||| |||||| |||| Sbjct 349 TCTGGCTTCAACGTTTATCCCGCACCCGTGGCTGTCCCAGCAGGATTTCAGCCGCTTTGT 408 Query 12549 GCTGGACTATCTGGTGTTCGGCAATGCCTTTGCCGAGCTGCGCCGTAACGGCCTCGGTGA 12608 |||||| | |||||||||||| ||||| ||| || ||| | | | |||| | Sbjct 409 GCTGGATTTTCTGGTGTTCGGTAATGCGTTTCTGGAAAAGCGTTACAGCACCACCGGTAA 468 Query 12609 GCCGTGGCGACTGGAAACCACACCCGCGAAGTTTACCCGCCGGGGCGTGGAGGAAGGCGT 12668 | ||||||||||| |||| || || | ||||||||| ||||||||||| | || Sbjct 469 GGTCATCAGACTGGAAACCTCACCGGCAAAATATACCCGCCGTGGCGTGGAGGAGGATGT 528 Query 12669 TTACTGGTTTGTGAATGACTGGAAAGAGCCG-CATCCGTTCGCCGCTGGCAGCGTCTTCC 12727 |||||||| ||| || || |||||| || || ||||| | ||| ||| || | Sbjct 529 TTACTGGTGGGTGCCGTCCTTCAACGAGCCGACAGCC-TTCGCGCCCGGCTCCGTGTTTC 587 Query 12728 ACCTCATTGAGCCGGATATTAACCAGGAGCTGTACGGCCTGCCGGAATATCTCAGCGCGT 12787 |||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 588 ACCTGCTGGAGCCGGATATTAATCAGGAGCTGTACGGCCTGCCGGAATATCTCAGCGCCC 647 Query 12788 TAAACTCTGCCTGGCTGAATGAAGCGGCCACGCTGTTTCGCCGCAAGTATTATCAGAACG 12847 | |||||||||||||||||||| | ||||||||||| |||||||||||||| | |||| Sbjct 648 TTAACTCTGCCTGGCTGAATGAGTCAGCCACGCTGTTCCGCCGCAAGTATTACGAAAACG 707 Query 12848 GCGCACACGCAGGCTACATCCTGTATATGACCGACGCGGCGCAGAGCAGCAGCGATATCG 12907 |||| || || || |||||| |||| | ||||| || | |||| ||| |||||||| Sbjct 708 GCGCTCATGCCGGATACATCATGTACGTTACCGATGCCGTGCAGGATCGCAACGATATCG 767 Query 12908 ACCGGATGCGCCAGGCGATGCGCGACACGAAAGGCCTGGGTAACTTCCGCAATCTGTTTA 12967 | | | ||| | ||| | ||||||||| ||||| || |||||| Sbjct 768 AAATGCTTCGCGAAAACATGGTGAAGTCGAAAGGCCGCAACAACTTTAAAAACCTGTTTC 827 Query 12968 TGTACGCGCCGAACGGCAAGCCGGACGGAATTAAGATCCTGCCGCTCAGCGAGGTGGCGA 13027 | || || ||| | || || | ||||| ||||| || | |||||||| || ||||| | Sbjct 828 TCTATGCCCCGCAGGGGAAAGCTGACGGCATTAAAATTATCCCGCTCAGTGAAGTGGCAA 887 Query 13028 CGAAAGATGATTTCTTTAACATCAAAAAGGCCAGCCGTGACGACCTGCT 13076 |||| || ||||| ||||| |||||||| |||||| | |||||||| Sbjct 888 CGAAGGACGATTTTTTTAATATCAAAAAAGCCAGCGCCGCTGACCTGCT 936 >seq15822 Length=778 Score = 367 bits (406), Expect = 2e-97 Identities = 540/756 (71%), Gaps = 9/756 (1%) Strand=Plus/Plus Query 10661 GCGCGGTTAATTCAGCTCATCCTGAAAGAGGTCAAAGGCAATGGTGACTACAAAGAGATA 10720 |||||| | | ||||||||| | ||| | ||| | ||||||| ||| || || Sbjct 3 GCGCGGCTGACCCAGCTCATCATCAAACCGCAGAAAACCGGCGGTGACTTCAAGGAAATT 62 Query 10721 GACGCGCTTGGCCGTCAGATTGAACGCCTCGCCCGCGTGGAGCGCTACCGCAGCAGCGGC 10780 ||| ||| || || ||||||||||| || || || || | |||||| || | |||| Sbjct 63 GACCTGCTGGGACGCCAGATTGAACGACTGGCACGGGTAAATCGCTACAGCCAGACCGGC 122 Query 10781 AACGAGGCCGATCTGAATCCGAACGTACGC-AACCGTAACAAAGGCGAGCGCCAGCCGGT 10839 |||||||| || || ||||||||||| ||| ||||| |||||||||| ||| | || Sbjct 123 AACGAGGCAGACCTTAATCCGAACGT-CGCTAACCGCAACAAAGGCGGGCGGC-GCAAAC 180 Query 10840 CGTGAA-GAACGTCTTCAGCGACGAGCAGGCGGAAAAGCTG-ACCGGCCTGTTTATGGAT 10897 || || ||| | ||||| |||||| ||||||||| | | | | | | || | Sbjct 181 CGAAAAAGAATTTTTTCAGTGACGAGGCCATCGAAAAGCTGGAGCAGATTTTCTTTG-AG 239 Query 10898 AACTGCTTTGAATATCAGCTCAACTGGCACAAAGCCGGACTGGATCACCGTATCCGCAAC 10957 | | || || |||||| | ||||| | ||||| || || ||||| |||||| | Sbjct 240 CAGTCTTTCGACTATCAGTTGCACTGGTATCGCGCCGGGCTTGAGCACCGCATCCGCGAT 299 Query 10958 ATCCTGAAGTCGCGCCAGATAGGTGCCACGTTCTACTTTGCCCGCGAGGCGCTGATTGAC 11017 |||||||| || |||||||| || || ||||| || ||| |||||||||||||| | | Sbjct 300 ATCCTGAAATCCCGCCAGATTGGCGCAACGTTTTATTTTTCCCGCGAGGCGCTGCTGCGC 359 Query 11018 GCGCTGACCACCGGGCGCAACCAGATATTTTTGTCGGCCAGCAAGGCGCAGGCGCACGTC 11077 || |||| ||||| | |||||||| ||| |||||||||| || |||||||| | || Sbjct 360 GCCCTGAAAACCGGTCATAACCAGATTTTTCTGTCGGCCAGTAAAACGCAGGCGTATGTG 419 Query 11078 TTTAAAAACTACATCATTGACTTTGCCCGCCAGGTGGACGTTGACCTGAAGGGCGACCCG 11137 || | |||||||| | |||||||| | ||| ||||||||||| | || |||||| Sbjct 420 TTCCGCGAATACATCATCGCCTTTGCCCATCTGGTTGACGTTGACCTTACCGGTGACCCG 479 Query 11138 ATTGTGCTG---CCGAACGGTGCCCGCCTGATTTTTCTTGGCACCAACGTGCGCACCGCG 11194 ||||| ||| ||||| || ||||||||||| ||||||||| ||||||| Sbjct 480 ATTGTCCTGGGCAATAACGGCGCAAAACTGATTTTTCTCGGCACCAACTCCAACACCGCG 539 Query 11195 CAGAGCTACACCGGCAACCTGTATCTCGATGAATATTTCTGGATACCGAAATTCCAGGAG 11254 |||||| | | |||| ||||||| |||| || ||||||||| ||||| || |||| Sbjct 540 CAGAGCCATAACGGCGACCTGTACGTCGACGAGATTTTCTGGATCCCGAATTTTCAGGTA 599 Query 11255 CTGCGAAAGGTCGCCAGCGGCATGTCGCTGCATAAAAAGTGGCGCACCACCTACTTTTCC 11314 ||||| ||||| || || ||| | || | | |||| | ||||| || ||| Sbjct 600 CTGCGTAAGGTGGCATCAGGTATGGCCTCACAGAGTCACCTGCGCTCGACCTATTTCTCC 659 Query 11315 ACGCCGTCGAGCCTGTCGCACTCCGCTTATCCGTTCTGGTCGGGCGAGCTGTTCAACAAA 11374 || ||||| | ||| ||||| ||| || |||||||||||||| || ||||| ||| Sbjct 660 ACCCCGTCCACGCTGGCGCACGACGCCTACCCGTTCTGGTCGGGTGAACTGTTTAACCGG 719 Query 11375 GGGCGGCGCAGCAAAGCCGATCGCATCGAAATCGAC 11410 || || |||| ||||| ||| | ||||||||| Sbjct 720 GGACGCGCCAGCGCCGCCGAACGCGTGGAAATCGAC 755 >seq11968 Length=1601 Score = 205 bits (226), Expect = 2e-48 Identities = 298/421 (71%), Gaps = 0/421 (0%) Strand=Plus/Plus Query 21278 GCCAGCCGCGTCAGAAATTTGGCGTCTGTCTCCTGCGTCTGGTCGATATGGCGCACCGCA 21337 || || || ||||| ||||| || || | |||||||| ||||||||| || | | | Sbjct 82 GCAAGGCGGGTCAGGAATTTTGCATCAGACTCCTGCGACTGGTCGATGTGCGGGATTTTA 141 Query 21338 ACGCCTGTGAATTCAGCCGCCACAGCAGGGGCCAGCTTGTTGCGTCCGGCTATCTCTTTC 21397 | || | | | | || ||| | ||||| |||| || ||||||| | | Sbjct 142 ATTCCGGCCAGTGACGGAGCGACACTGGCTTCCAGCCTGTTACGGGAGGCTATCGCCTCA 201 Query 21398 AGCACAGCGCCCAGGGTGGTGTCATGCCAGGATGTTTCACGGCGTGAGTTCAGCGTGCCG 21457 | | || || || |||||||||||||| || ||| ||||| || || ||||| ||| Sbjct 202 ACAATCGCACCGAGCGTGGTGTCATGCCATGAGCCTTCCCGGCGGGAATTGAGCGTCCCG 261 Query 21458 CGAAAGTCGGCGCTGCGGGCGCGAATGGTCAGCGTGTCCGGTGCGCCGTGATGCTCCACT 21517 ||||| || || || |||||||| ||||| | | ||||| ||||| | || || || Sbjct 262 CGAAAATCTGCACTCCGGGCGCGGATGGTAACCACATCCGGCGCGCCCCGGTGTTCAACC 321 Query 21518 TCATCAACGGTAAACTCACCCTTGTCCGTCAGCGGCTGCCCCTGCCAGCCGAGAAACAAT 21577 |||||||||||||| | || ||| ||| | || | |||||||| | ||| Sbjct 322 TCATCAACGGTAAATTTCCCTTTGCATACCAGGGCAAAACCTTTCCAGCCGATATACACC 381 Query 21578 TTCACCACCGCACCGCGTACCGGCAGCGCCAGCTGGCCGTCGGCGTCGTCCAGCTCAATA 21637 ||| || || || || ||||||||| | | ||| |||||||| |||| ||| |||||| Sbjct 382 GTCAGGACAGCGCCACGAACCGGCAGCCCGACCTGCCCGTCGGCATCGTTCAGTTCAATA 441 Query 21638 TCCAGCTGGTCAGCCTCAAAGCCCCGGTTATCGGTAAGCGTCAGCGACAGCAACCGGTCG 21697 || ||||||||||||||||||||||||||||| || || |||| || || |||||| Sbjct 442 TCAAGCTGGTCAGCCTCAAAGCCCCGGTTATCCGTCAGGGTCATGCTCATCAGACGGTCG 501 Query 21698 C 21698 | Sbjct 502 C 502 Score = 89.7 bits (98), Expect = 1e-13 Identities = 177/258 (69%), Gaps = 8/258 (3%) Strand=Plus/Plus Query 22039 ACGTACATGCCGTAAATTTTACCGTTACCGCCTATCAGCGGCCACGCCCGGCCCTCGTCG 22098 || |||||||||||||| | ||| | || | | || ||||||||||||||| || || Sbjct 792 ACATACATGCCGTAAATCATGCCGGTGCCATCCAGCAACGGCCACGCCCGGCCTTCATCT 851 Query 22099 GCCATCGCTTTCAGCGTCAGCAGCGACACCGCACCGCCGGTGATTTCCGGGCGCAGCTCG 22158 |||||| | | ||||| || || || | |||||||| | ||| || ||| | Sbjct 852 GCCATCAGTCTGAGCGTGGTCATCGTCAGCTTGCCGCCGGTCAGTTCGGGATAAAGCACA 911 Query 22159 CCGCTCAGCGTGATTTTTTCATCGCCCGGCCCGATAAACTGTGCCGAGGCACGCCG---C 22215 ||| ||||| || ||||| || || |||| |||||| ||||| ||| Sbjct 912 CCGGCAAGCGTCATGTTTTCCTCACCAACGCCGAGAAACTG---GTAGGCATCCCGTTTA 968 Query 22216 CCGACGCGGCTGTTTGTCGGCCAGCGATAATCAGTGCTGTGTTGCA-GTTCGTCATAGGG 22274 |||| ||| |||| ||||||||||||||| | | |||| | || | | || Sbjct 969 CCGATACGGGAATTTGACGGCCAGCGATAATCTGATTCACGCTGCATGGTC-TGGTGTGG 1027 Query 22275 CAGCGTCTGGCGCATGAA 22292 ||||||||||||||| || Sbjct 1028 CAGCGTCTGGCGCATAAA 1045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94460948733984