Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq2430 111 3e-19 seq285 98.7 2e-15 >seq2430 Length=18656 Score = 111 bits (122), Expect = 3e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 ||||||||||| ||||||| |||||||| || || ||||| ||||| || || ||||| Sbjct 5919 TTACCAGCAAAAATTAATCGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTGGATTTTG 5978 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 ||| ||||| || | ||||| | |||||||| |||||||| ||||| ||||| Sbjct 5979 GCTTTGACATTCTCAATTGTGTCTGAAGCCTCTACTTCAAGAGTAATTGTTTTTCCAGTA 6038 Query 192514 AATGTTTTAATAAATATCTGCATT 192537 | || |||| ||| ||||||||| Sbjct 6039 AGGGTCTTAACAAAGATCTGCATT 6062 Score = 102 bits (112), Expect = 2e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 ||||||||||| || || | ||||||||| || || || |||||||| || || ||||| Sbjct 5622 TTACCAGCAAAAATCAAACGCTGTTGATCCGGAGGAATCCCTTCTTTGTCCTGAATTTTT 5681 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 ||| ||||| || | || |||| || ||||| ||||| |||||||| ||||| Sbjct 5682 GCTTTGACATTTTCAATCGTGTCAGACGCCTCAACTTCAAGAGTTATGGTTTTGCCAGTA 5741 Query 192514 AATGTTTTAATAAATATCTGCATT 192537 | ||||| | ||| ||||||||| Sbjct 5742 AGCGTTTTCACAAAAATCTGCATT 5765 >seq285 Length=50150 Score = 98.7 bits (108), Expect = 2e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 192396 ACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATT 192455 ||| ||||| || |||| ||| ||||| || || || || || |||||||| ||||| Sbjct 46406 ACCTGCAAAAATCAATCGCTGCTGATCGGGAGGAATACCCTCCTTATCTTGGATTTTTGC 46347 Query 192456 TTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAA 192515 || || || ||||| || || | ||| ||||| ||||||||||| |||||||| || Sbjct 46346 CTTCACGTTCTCTATAGTGTCCGAAGCTTCAACTTCAAGAGTAATGGTCTTACCAGTCAA 46287 Query 192516 TGTTTTAATAAATATCTGCATTTT 192539 ||||| | || || |||||||| Sbjct 46286 AGTTTTCACGAAAATTTGCATTTT 46263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984229846093200