Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1074 96.9 5e-14 seq2833 87.8 3e-11 >seq1074 Length=30291 Score = 96.9 bits (106), Expect = 5e-14 Identities = 165/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || ||||| ||||| || ||||| || || || ||| | ||||| || || ||| Sbjct 21752 TGTATTTCGTGACTGCCTTCGTGCCCTCCGAAACTGCATGCTTCGCCAGCTCACCAGGCA 21811 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||||| | || || || ||||| || |||| || || | || ||||| || | Sbjct 21812 GAATCAGCCTAACTGCCGTTTGGATTTCACGGGACGAAATAGTAGTTCGTTTGTT-GTAC 21870 Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 | |||| |||| || || | | || || || | | ||| || || ||||||||| Sbjct 21871 TGGGCCAACCGGCTTGCTTCAGCCGCAATTCGCTCAAATACGTCATTAACGAACGAGTTC 21930 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACC 1485705 ||||||||||| | ||| |||||||| || || || ||||| ||||||||| Sbjct 21931 ATGATCGACATTGCCTTGGACGAGATGCCGGTATCTGGATGTACCTGTTTGAGCACC 21987 >seq2833 Length=16420 Score = 87.8 bits (96), Expect = 3e-11 Identities = 177/260 (68%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || || || |||||||| || || || || || ||| | || ||||| || ||| Sbjct 6588 TGTATTTTGTAACAGCCTTGGTGCCTTCCGACACTGCATGCTTCGCAAGTTCTCCAGGCA 6529 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || | || || |||||||||||||| | || ||| | || || || | Sbjct 6528 AAATGAGCCTGACTGCAGTCTGGATCTCGCGAGATGAAATTGTGGACCTTTTATT-GTAC 6470 Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 | || || |||| ||||| | | || | |||| | ||||||||||| || ||| Sbjct 6469 TGGGCAAGCCGGCTAGCCTCAGCAGCAATCCTTTCGAAAACATCGTTGACAAAAGAATTC 6410 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||||||| || ||||| || ||| ||||| |||||||| || || Sbjct 6409 ATGATTGACATCGCCTTCGAAGAGATTCCGGTGTCAGGGTGGACCTGCTTCAGAACACGA 6350 Query 1485709 TAAACAAAGGACGAGTACGA 1485728 ||||| || |||||| || Sbjct 6349 TAAACGTAGACCGAGTAGGA 6330 Score = 87.8 bits (96), Expect = 3e-11 Identities = 177/260 (68%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || || || |||||||| || || || || || ||| | || ||||| || ||| Sbjct 14136 TGTATTTTGTAACAGCCTTGGTGCCTTCCGACACTGCATGCTTCGCAAGTTCTCCAGGCA 14077 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || | || || |||||||||||||| | || ||| | || || || | Sbjct 14076 AAATGAGCCTGACTGCAGTCTGGATCTCGCGAGATGAAATTGTGGACCTTTTATT-GTAC 14018 Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 | || || |||| ||||| | | || | |||| | ||||||||||| || ||| Sbjct 14017 TGGGCAAGCCGGCTAGCCTCAGCAGCAATCCTTTCGAAAACATCGTTGACAAAAGAATTC 13958 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||||||| || ||||| || ||| ||||| |||||||| || || Sbjct 13957 ATGATTGACATCGCCTTCGAAGAGATTCCGGTGTCAGGGTGGACCTGCTTCAGAACACGA 13898 Query 1485709 TAAACAAAGGACGAGTACGA 1485728 ||||| || |||||| || Sbjct 13897 TAAACGTAGACCGAGTAGGA 13878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914136779706248