Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2430 129 5e-25 seq285 111 1e-19 seq2949 82.4 6e-11 >seq2430 Length=18656 Score = 129 bits (142), Expect = 5e-25 Identities = 117/145 (81%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || |||||| | ||||| | || |||||||| ||||| || |||||||| || |||||| Sbjct 5622 TTACCAGCAAAAATCAAACGCTGTTGATCCGGAGGAATCCCTTCTTTGTCCTG-AATTTT 5680 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||||||| |||| | |||||||| || |||||||||||||| ||||||||||| Sbjct 5681 TGCTTTGACATTTTCAATCGTGTCAGACGCCTCAACTTCAAGAGTTATGGTTTTGCCAGT 5740 Query 29763 TAAGGTTTTAACAAATATCTGCATT 29787 | ||||| ||||| ||||||||| Sbjct 5741 AAGCGTTTTCACAAAAATCTGCATT 5765 Score = 120 bits (132), Expect = 2e-22 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || |||||| | || |||| ||| ||||| || ||||| ||||||||||| || | ||| Sbjct 5919 TTACCAGCAAAAATTAATCGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTGGATTTTG 5978 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 ||||||| | || | ||||| ||| |||||||||||||| || ||||| ||||| Sbjct 5979 GCTTTGACATTCTCAATTGTGTCTGAAGCCTCTACTTCAAGAGTAATTGTTTTTCCAGTA 6038 Query 29764 AAGGTTTTAACAAATATCTGCATT 29787 | ||| |||||||| ||||||||| Sbjct 6039 AGGGTCTTAACAAAGATCTGCATT 6062 Score = 100 bits (110), Expect = 2e-16 Identities = 110/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || ||||| | || || | || ||||||||||| || |||||||||||||| ||| || Sbjct 5010 TTACCAGCGAAAATTAAACGCTGTTGATCCGGCGGTATTCCCTCTTTGTCTTG-AATCTT 5068 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | ||| ||| |||| | ||||| ||| || |||||||| ||||| ||||| ||||| Sbjct 5069 CGCTTTCACATTTTCAATGGTGTCCGAAGCCTCAACTTCAAGCGTTATCGTTTTCCCAGT 5128 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 | ||| ||||| || || ||||| Sbjct 5129 AAGGGTCTTAACGAAAATTTGCAT 5152 Score = 82.4 bits (90), Expect = 6e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || ||||| | || || | ||| |||||||| ||||| || || ||||| || ||| || Sbjct 5325 TTACCAGCGAAAATTAAACGTTGTTGATCCGGAGGAATCCCTTCCTTGTCCTG-AATCTT 5383 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | ||| ||| | || | || ||||| || ||||| || ||||||||||| || || Sbjct 5384 CGCTTTAACATTCTCAATCGTATCAGACGCCTCAACTTCGAGCGTTATAGTTTTCCCGGT 5443 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 | |||||||| || |||||||| Sbjct 5444 AAGAGTTTTAACGAAAATCTGCAT 5467 >seq285 Length=50150 Score = 111 bits (122), Expect = 1e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT 29706 || ||| | ||||||| |||||||| || ||||||||||| || ||||| | |||| Sbjct 46405 CCTGCAAAAATCAATCGCTGCTGATCGGGAGGAATACCCTCCTTATCTTGGATTTTTGCC 46346 Query 29707 TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAG 29766 || || | |||| |||||| ||| ||| ||||||||||| || || || ||||| || Sbjct 46345 TTCACGTTCTCTATAGTGTCCGAAGCTTCAACTTCAAGAGTAATGGTCTTACCAGTCAAA 46286 Query 29767 GTTTTAACAAATATCTGCATTTTAAA 29792 ||||| || || || |||||||| || Sbjct 46285 GTTTTCACGAAAATTTGCATTTTGAA 46260 >seq2949 Length=15852 Score = 82.4 bits (90), Expect = 6e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG- 29705 || ||| | || || | ||||||||||| || || || || ||||| || ||| || | Sbjct 11470 CCTGCAAAAATTAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTG-AATCTTCGC 11412 Query 29706 TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAA 29765 ||| ||| |||| | ||||| ||| || || || | || || ||||||||||| | Sbjct 11411 TTTCACATTTTCAATTGTGTCCGAAGCCTCCACCTCTAAGGTGATTGTTTTGCCAGTAAG 11352 Query 29766 GGTTTTAACAAATATCTGCATTTT 29789 |||||| ||||| |||||||| || Sbjct 11351 GGTTTTTACAAAAATCTGCATCTT 11328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385126091556312