Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_023588.1 Length=33525 Score E Sequences producing significant alignments: (Bits) Value seq15822 163 6e-36 seq8026 107 4e-19 >seq15822 Length=778 Score = 163 bits (180), Expect = 6e-36 Identities = 462/698 (66%), Gaps = 19/698 (3%) Strand=Plus/Minus Query 3686 GCGTCCCTTGTTGAAGCGCTCGCCGGTCCAGAAGTCGAAGGCTTCATGCGCCATGGTGGA 3745 ||||||| ||| || | || || | |||||| | |||| || ||||||| ||||| Sbjct 725 GCGTCCCCGGTTAAACAGTTCACCCGACCAGAACGGGTAGGCGTCGTGCGCCAGCGTGGA 666 Query 3746 CGGCGTGCTGAAGTAGGTCTTGCGCCACTTCTTGTGCATCGCCATGCCGCTGGCGACCTT 3805 ||| ||| ||| |||||| |||| | | || ||||| || || ||||| Sbjct 665 CGGGGTGGAGAAATAGGTCGAGCGCAGGTGACTCTGTGAGGCCATACCTGATGCCACCTT 606 Query 3806 GTTCAGCTGGTTGAAACCGTAGG-TCCAGAAGAACTCGTCAAAGTAGAAATTGCCGTGGT 3864 ||| | ||||| || ||||||| | |||||| | ||| | | ||||| | Sbjct 605 ACGCAG-TACCTGAAAATTCGGGATCCAGAAAATCTCGTCGACGTACAGGTCGCCGTTAT 547 Query 3865 AGCCCTGTGCGGTGCGGGCGTTGGTGCCCAGGAAGAACAGCTCGGCGCC---ATTGGCCA 3921 || ||| |||||| || ||||||||| || || | ||| | ||||| |||| ||| Sbjct 546 GGCTCTGCGCGGTGTTGGAGTTGGTGCCGAGAAAAATCAGTTTTGCGCCGTTATTGCCCA 487 Query 3922 GGGTGATCGGGTCGCCGGTCAGGTCACGGTCCAGCACCTCACGCACGAAGCCCCGCATAT 3981 || |||||||| ||||| |||||| ||| | || | ||| ||| | || | Sbjct 486 GGACAATCGGGTCACCGGTAAGGTCAACGTCAACCAGATGG-GCA--AAGGCGATGATGT 430 Query 3982 AGCCGAGGAAGATGTGCGCTTGGCTCTTGGATGCGCTCAGGAAAATCTGGTTGCGGCCGG 4041 | || |||| | | ||| || | || || ||| ||||||||||| | |||| Sbjct 429 ATTCGCGGAACACATACGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTATGACCGG 370 Query 4042 TGGTCAGCGCGTCGATCAGCGCCTCGCGGGCGAAGTAGTAGGTGGCACCGATCTGGCGCG 4101 | |||| ||| | |||||||||||||| || || | || || || |||||||| | Sbjct 369 TTTTCAGGGCGCGCAGCAGCGCCTCGCGGGAAAAATAAAACGTTGCGCCAATCTGGCGGG 310 Query 4102 ACTTCAGGATGATGCGCGTGCGTTCGTT--GCCCGCC-CGGTACCAATCGCGCTGGTAGT 4158 | |||||||| ||| |||| | | ||||| | || ||||| | ||| |||| Sbjct 309 ATTTCAGGATATCGCGGATGCGGTGCTCAAGCCCGGCGCGATACCAGTGCAACTGATAGT 250 Query 4159 CGAAACAGCCATCCACGAACGCCGTCTGCAGGCGCTCGATCTCTTCCTCGCTGAACTCGT 4218 ||||| | || | ||| | || ||| ||||| | || || ||||| | Sbjct 249 CGAAAGACTGCTCAAAGAAAATCTGCTCCAGCTTTTCGATGGCCTCGTCACTGAAAAAAT 190 Query 4219 TCTTGCGCGCCTTCTTCTTGGGCGC-TGCGTTGCGGTTGGCCACCGCCGGATTGAGGTCA 4277 |||| || || | | ||| | ||||||||| || || |||||| ||||| Sbjct 189 TCTTTTTCGGTTTGCGCC-GCCCGCCTTTGTTGCGGTTAGCGACGTTCGGATTAAGGTCT 131 Query 4278 GCCTCGTTGCCACCGCCCTGG---TACCGTTGAATGCGCGCCTGCCGTTCCAACTGGCGG 4334 ||||||||||| | |||| || || | | || ||| | ||||| | |||||| Sbjct 130 GCCTCGTTGCC---GGTCTGGCTGTAGCGATTTACCCGTGCCAGTCGTTCAATCTGGCGT 74 Query 4335 TGCAGCAGATCAATCTCTTTGAAGTCACCGCCGGTCTT 4372 |||||| ||||| || ||||||||||||||||| || Sbjct 73 CCCAGCAGGTCAATTTCCTTGAAGTCACCGCCGGTTTT 36 >seq8026 Length=4067 Score = 107 bits (118), Expect = 4e-19 Identities = 125/167 (75%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 2210 GGGATCGGTCATGTAGAGGATGTAGCCGGCGTGCGAACCGTTGTTGTAATACTTCCGGCG 2269 || |||||| | ||| | |||||| ||||| || | ||||| | ||||||||| ||||| Sbjct 745 GGCATCGGTAACGTACATGATGTATCCGGCATGAGCGCCGTTTTCGTAATACTTGCGGCG 686 Query 2270 GAAAAGCGTGGCCGACTCATTCAGCAACGCGGCCTGTACG--GCTGGCATCCATTCCGGC 2327 ||| |||||||| |||||||||||| | || | | | | |||| || |||||||| Sbjct 685 GAACAGCGTGGCTGACTCATTCAGCCAGGCAGAGTTAAGGGCGCTGAGAT--ATTCCGGC 628 Query 2328 AGGCCGTAGATTTCCTGATCCGCGTCCGCCTCGCGCAGCTGGAACAC 2374 |||||||| | ||||||| |||| ||| |||| || ||||| Sbjct 627 AGGCCGTACAGCTCCTGATTAATATCCGGCTCCAGCAGGTGAAACAC 581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107133163661008