Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2949 91.5 1e-13 seq2430 87.8 2e-12 >seq2949 Length=15852 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 |||| | |||||||| || |||||||||||||||||||| ||||| || | | Sbjct 11463 AAATTAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGAATCTTCGCTTTCACAT 11404 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| ||||| | | |||||| || | ||||| |||||||| || || ||||||| Sbjct 11403 TTTCAATTGTGTCCGAAGCCTCCACCTCTAAGGTGATTGTTTTGCCAGTAAGGGTTTTTA 11344 Query 133648 CGAAAATCTGCAT 133660 | ||||||||||| Sbjct 11343 CAAAAATCTGCAT 11331 >seq2430 Length=18656 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 |||| || |||||||||||||| ||||| || |||||||| ||| ||| ||| | | Sbjct 4721 AAATAAGACGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATTTTTGCCTTAACAT 4780 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 ||| | || || | || ||| || || | || | ||||| || |||||||| || | Sbjct 4781 TCTCGATAGTATCTGAGGCCTCAACTTCCAAAGTAATTGTTTTCCCTGTCAGAGTCTTCA 4840 Query 133648 CGAAAATCTGCAT 133660 ||||||||||||| Sbjct 4841 CGAAAATCTGCAT 4853 Score = 84.2 bits (92), Expect = 2e-11 Identities = 107/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || ||| |||| | || || || || ||||| || ||||||||||| ||| | Sbjct 5324 CTTACCAGCGAAAATTAAACGTTGTTGATCCGGAGGAATCCCTTCCTTGTC-CTGAATCT 5382 Query 133577 TTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | |||| | | | ||||| ||| || | | ||| || |||| || | ||||| |||| Sbjct 5383 TCGCTTTAACATTCTCAATCGTATCAGACGCCTCAACTTCGAGCGTTATAGTTTTCCCGG 5442 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | |||||||| |||||||||||||| Sbjct 5443 TAAGAGTTTTAACGAAAATCTGCAT 5467 Score = 82.4 bits (90), Expect = 7e-11 Identities = 100/134 (75%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TTGAGC 133586 |||| || |||||||||||||| ||||| |||||||| || ||| |||||| || | Sbjct 6237 AAATAAGACGCTGCTGGTCGGGCGGGATCCCTTCCTTATC-CTGAATTTTTGCTTTCACG 6295 Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | || | ||||||| | || || || | |||| |||||| || || || ||||| Sbjct 6296 TTTTCGATGGTGTCGGACGCTTCAACCTCAAGCGTGATGGTTTTACCCGTAAGGGTTTTG 6355 Query 133647 ACGAAAATCTGCAT 133660 |||||||| ||||| Sbjct 6356 ACGAAAATTTGCAT 6369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483300959983680