Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq15822 203 8e-48 seq8026 176 1e-39 >seq15822 Length=778 Score = 203 bits (224), Expect = 8e-48 Identities = 462/690 (67%), Gaps = 20/690 (3%) Strand=Plus/Minus Query 9587 CCGCGGTTGAACAGTGCGCCGGACCAGAACGGGTAGGCCTCATGCGACAAGCTGGACGGC 9646 || ||||| |||||| | || ||||||||||||||||| || |||| || ||||||| Sbjct 721 CCCCGGTTAAACAGTTCACCCGACCAGAACGGGTAGGCGTCGTGCGCCAGCGTGGACGGG 662 Query 9647 GTGGAGAAGTACGTTTGCCGCCAGTGCTTGTGGATCGCCATGCCGGACGCGACCTTGCGC 9706 |||||||| || || ||| ||| | || ||||| || || || ||||| ||| Sbjct 661 GTGGAGAAATAGGTCGAGCGCAGGTGACTCTGTGAGGCCATACCTGATGCCACCTTACGC 602 Query 9707 AGTTCCTGGAAGCGCGGCACCCAGAAGTACTCGTCGAAGTACAGGTTGCCGTGGTAGCTC 9766 ||| |||| || ||| | |||||| |||||||| |||||||| ||||| | |||| Sbjct 601 AGTACCTGAAAATTCGGGATCCAGAAAATCTCGTCGACGTACAGGTCGCCGTTATGGCTC 542 Query 9767 TGCGCGGTGCGGGCGTTGGTCCCGAGGAAGTACAGCGTCGCCCCG---TTGGGCAACACC 9823 ||||||||| || |||||| ||||| || ||| | || ||| ||| || || Sbjct 541 TGCGCGGTGTTGGAGTTGGTGCCGAGAAAAATCAGTTTTGCGCCGTTATTGCCCAGGACA 482 Query 9824 ATCGGGTCGCCCTTCAGCTCGACG----CCGGCTGCGTCCTTCGCGAATTGGATGATGTA 9879 |||||||| || | || || ||| || | || || || ||||||||| Sbjct 481 ATCGGGTCACCGGTAAGGTCAACGTCAACCAGATG-------GGCAAAGGCGATGATGTA 429 Query 9880 CTGCTTGAAGACGTGCGCCTGTGCCTTGCTGGCCGATAGAAAAATCTGGTTGCGGCCAGT 9939 | ||| || | |||||| | || |||||||| |||||||||||||| | || || Sbjct 428 TTCGCGGAACACATACGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTATGACCGGT 369 Query 9940 GGTCAGCGCGTCGATGAACGCCTCGCGTGCGAAGTACCACGTCGCGCCGATCTGCCGGCT 9999 |||| ||| | | ||||||||| | || || |||| ||||| ||||| ||| Sbjct 368 TTTCAGGGCGCGCAGCAGCGCCTCGCGGGAAAAATAAAACGTTGCGCCAATCTGGCGGGA 309 Query 10000 CTTGAGCAGGTTGCGGATGCGCTCGACCTGCCCAGCCTCGTACCAGACGCGCTGGTAATC 10059 || || | | ||||||||| | | |||| || |||||| ||| || || Sbjct 308 TTTCAGGATATCGCGGATGCGGTGCTCAAGCCCGGCGCGATACCAGTGCAACTGATAGTC 249 Query 10060 GAACATCGAGTCGCGGAAGGCCTCCAGGAGCTGCGTCTGT-TCCTCGGGGCTGATCGCGT 10118 ||| | || ||| || | |||| || | ||||| |||| | Sbjct 248 GAAAGACTGCTCAAAGAAAATCTGCTCCAGCT-TTTCGATGGCCTCGTCACTGAAAAAAT 190 Query 10119 TGCGCTCGGGCTTGCTGCGCGGTCCCTTGTTGCGATTCGCCACCTTCGGGTTCAGGTCGG 10178 | | || |||| ||| || |||||||| || || || ||||| || ||||| | Sbjct 189 TCTTTTTCGGTTTGCGCCGCCCGCCTTTGTTGCGGTTAGCGACGTTCGGATTAAGGTCTG 130 Query 10179 TTTCGTTGCCG--CTGGCTTCGTACCGGCGCACGCGCGCCATGCGCTCCATTTGTCGGCC 10236 ||||||||| |||||| ||| || || || |||| || || || || || || Sbjct 129 CCTCGTTGCCGGTCTGGCT--GTAGCGATTTACCCGTGCCAGTCGTTCAATCTGGCGTCC 72 Query 10237 GAGCAGGTCGATTTCCTTGTAGTCCCGGCC 10266 |||||||| ||||||||| |||| | ||| Sbjct 71 CAGCAGGTCAATTTCCTTGAAGTCACCGCC 42 >seq8026 Length=4067 Score = 176 bits (194), Expect = 1e-39 Identities = 390/580 (67%), Gaps = 4/580 (1%) Strand=Plus/Minus Query 8019 TCGCGCAGCGTGTCGACATCCTCTTGCCTCTGCGCCGCGTCGGTCATGTACAGGATGAAA 8078 ||||| ||| | |||| ||| | | |||| | || ||||| | ||||| |||| | Sbjct 780 TCGCGAAGCATTTCGATATCGTTGCGATCCTGCACGGCATCGGTAACGTACATGATGTAT 721 Query 8079 CCGGCGTGGGAGCCGTTTTTGTAGTACCGGCGGCGGAACAGCGTGGCCGATTCGTTCAAC 8138 ||||| || | |||||||| ||| ||| |||||||||||||||||| || || |||| | Sbjct 720 CCGGCATGAGCGCCGTTTTCGTAATACTTGCGGCGGAACAGCGTGGCTGACTCATTCAGC 661 Query 8139 CATGTGGCGTTCAACGCGGACAGGTATTCCGGCAGGCCGTACACCTCCTGATTGATGTCC 8198 || | | ||| | ||| || ||||||||||||||||||| ||||||||| || ||| Sbjct 660 CAGGCAGAGTTAAGGGCGCTGAGATATTCCGGCAGGCCGTACAGCTCCTGATTAATATCC 601 Query 8199 GGTTCCTGGAGGTGGAACACTGAGCCGGCGGCGAA-GATGTACGGCTGCTGCCAGTTCTG 8257 || ||| | ||||| ||||| ||||||| ||||| | ||| ||||| | || | | Sbjct 600 GGCTCCAGCAGGTGAAACACGGAGCCGGGCGCGAAGGCTGT-CGGCTCGTTGAAGGACGG 542 Query 8258 CACGAAAAAATAGGTGTTCAGGTCGAGCCCGCGCCGCACGTACTTGGCCAGGGGCGTATC 8317 ||| | | || | | || | || || || || || ||| | | || || Sbjct 541 CACCCACCAGTAAACATCCTCCTCCACGCCACGGCGGGTATATTTTGCCGGTGAGGTTTC 482 Query 8318 GAGCCGGATTGTCCCGCCCAACACGTTTTCGCGGCGCTCCAGGTACGCATTGCCGAACAC 8377 || | ||| | || | | | || ||||| ||||||| |||||||| Sbjct 481 CAGTCTGATGACCTTACCGGTGGTGCTGTAACGCTTTTCCAGAAACGCATTACCGAACAC 422 Query 8378 CTGCCAGTCCAGCACCAGGCGCTCGAAGGTCGCGC-GCGACAGCAGCGGATGCGGAATGA 8436 | | | |||||||| | ||| ||| || || | |||||| ||| ||||| || | Sbjct 421 CAGAAAATCCAGCACAAAGCGGCTGAA-ATCCTGCTGGGACAGCCACGGGTGCGGGATAA 363 Query 8437 ACGTCGAGACCAGGATATTGCGCTTCACGTAGACGGCCGAGCTGTGGTGCGCGGCGGCGC 8496 |||| || |||| |||||||| || ||||| | | |||||||| ||| |||| || | Sbjct 362 ACGTTGAAGCCAGAATATTGCGTTTGACGTAAATCGGTGAGCTGTGATGCACGGCAGCAC 303 Query 8497 GGAACGAGCGCGCCAGGCCATCCCACGGCATGGGCGGTTCATACCACTGGCCCATGCGCA 8556 | | ||||| || | | || || |||||||| ||| | | | Sbjct 302 GCAGGCTTTTTGCCAGACCGGTAAAGCTGACCGGTGGCTCATACCATCTGCCGTTACTGA 243 Query 8557 TGCACTCGACGTAATCCAGCAGCTCGCGCCGGTCCAGCAC 8596 ||||||||||||||||||| | || || ||||| || || Sbjct 242 TGCACTCGACGTAATCCAGAATGTCACGGCGGTCGAGTAC 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127854682490176