Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2430 123 2e-23 seq2949 93.3 4e-14 seq285 93.3 4e-14 >seq2430 Length=18656 Score = 123 bits (136), Expect = 2e-23 Identities = 106/131 (81%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || ||||| | || ||||||||||| || |||| Sbjct 5764 ATGCAGATTTTTGTGAAAACGCTTACTGGCAAAACCATAACTCTTGAAGTTGAGGCGTCT 5705 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | |||||| ||||||||| ||||||||||| || || || |||||| Sbjct 5704 GACACGATTGAAAATGTCAAAGCAAAAATTCAGGACAAAGAAGGGATTCCTCCGGATCAA 5645 Query 27108 CAGCGTTTAAT 27118 |||||||| || Sbjct 5644 CAGCGTTTGAT 5634 Score = 114 bits (126), Expect = 1e-20 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 ||||||| || ||||| |||||||| || ||||| | || ||| | ||||| ||| | | Sbjct 6826 CCATGCAAATCTTTGTCAAAACTCTTACTGGCAAAACAATCACTTTGGAAGTCGAAGCTT 6767 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 ||||| | ||||||| || ||| ||||||||| || || ||||| || |||||||||| Sbjct 6766 CCGACACAATTGAGAATGTGAAAGCAAAAATTCAGGATAAGGAAGGAATTCCACCCGATC 6707 Query 27106 AACAGCGT 27113 |||||||| Sbjct 6706 AACAGCGT 6699 Score = 96.9 bits (106), Expect = 3e-15 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || || || | |||||||||||||| || | || Sbjct 6061 ATGCAGATCTTTGTTAAGACCCTTACTGGAAAAACAATTACTCTTGAAGTAGAGGCTTCA 6002 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| |||||| ||||| || |||||||| || || || || |||||| Sbjct 6001 GACACAATTGAGAATGTCAAAGCCAAAATCCAGGACAAAGAGGGAATTCCTCCAGATCAA 5942 Query 27108 CAGCGTTTAAT 27118 || || ||||| Sbjct 5941 CAACGATTAAT 5931 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || || || || || || | || || |||||||| || | || Sbjct 5153 CATGCAAATTTTCGTTAAGACCCTTACTGGGAAAACGATAACGCTTGAAGTTGAGGCTTC 5094 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | || ||| || |||||||||||||| || ||||| || ||||| Sbjct 5093 GGACACCATTGAAAATGTGAAAGCGAAGATTCAAGACAAAGAGGGAATACCGCCGGATCA 5034 Query 27107 ACAGCGTTTAATATACGCCGGCAA 27130 |||||||||||| | ||| || || Sbjct 5033 ACAGCGTTTAATTTTCGCTGGTAA 5010 >seq2949 Length=15852 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||||||||| || || ||||| | || || | || ||||| | || Sbjct 11331 ATGCAGATTTTTGTAAAAACCCTTACTGGCAAAACAATCACCTTAGAGGTGGAGGCTTCG 11390 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || ||||| ||||| |||||||| || || ||||| Sbjct 11391 GACACAATTGAAAATGTGAAAGCGAAGATTCAGGACAAGGAAGGCATCCCTCCGGATCAG 11450 Query 27108 CAGCGTTTAAT 27118 ||||||||||| Sbjct 11451 CAGCGTTTAAT 11461 >seq285 Length=50150 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| |||| || ||| | |||||||||||||| ||| | || Sbjct 46266 ATGCAAATTTTCGTGAAAACTTTGACTGGTAAGACCATTACTCTTGAAGTTGAAGCTTCG 46325 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || |||||| ||||| || || || || || |||||||| Sbjct 46326 GACACTATAGAGAACGTGAAGGCAAAAATCCAAGATAAGGAGGGTATTCCTCCCGATCAG 46385 Query 27108 CAGCGTTTAAT 27118 ||||| || || Sbjct 46386 CAGCGATTGAT 46396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434810583728640