Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2430 111 4e-19 seq2949 87.8 4e-12 >seq2430 Length=18656 Score = 111 bits (122), Expect = 4e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || ||||| || ||||| || || ||||| || || | |||||||| ||||| || ||| Sbjct 6227 TTACCTGCAAAAATAAGACGCTGCTGGTCGGGCGGGATCCCTTCCTTATCCTGAATTTTT 6286 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||||||||||||||||||||| || ||||||||| || ||||| || || ||||| Sbjct 6287 GCTTTCACGTTTTCGATGGTGTCGGACGCTTCAACCTCAAGCGTGATGGTTTTACCCGTA 6346 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 || || || || || | |||||| Sbjct 6347 AGGGTTTTGACGAAAATTTGCATT 6370 Score = 93.3 bits (102), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || ||||| || | |||||||| || ||||||| |||||||||||||| ||||| Sbjct 5324 CTTACCAGCGAAAATTAAACGTTGTTGATCCGGAGGAATCCCTTCCTTGTCCTGAATCTT 5383 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| || || || || || ||||| ||||| ||||| || || || || || || Sbjct 5384 CGCTTTAACATTCTCAATCGTATCAGACGCCTCAACTTCGAGCGTTATAGTTTTCCCGGT 5443 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || | |||||| Sbjct 5444 AAGAGTTTTAACGAAAATCTGCAT 5467 Score = 91.5 bits (100), Expect = 3e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 210968 CTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGAT 211027 || ||| || || || || | |||||||| || ||||||| ||| || ||||||||||| Sbjct 5915 CTTCTTACCAGCAAAAATTAATCGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTGGAT 5974 Query 211028 CTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC 211087 || ||| || || || || ||||| || || || || ||||| || || ||||| Sbjct 5975 TTTGGCTTTGACATTCTCAATTGTGTCTGAAGCCTCTACTTCAAGAGTAATTGTTTTTCC 6034 Query 211088 CGTGAGAGTCTTTACAAACACCTGCATT 211115 || || ||||| ||||| | ||||||| Sbjct 6035 AGTAAGGGTCTTAACAAAGATCTGCATT 6062 >seq2949 Length=15852 Score = 87.8 bits (96), Expect = 4e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 210975 CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGT 211034 ||||| || || | || || || || ||||| | |||||||||||||| ||||| | Sbjct 11470 CCTGCAAAAATTAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGAATCTTCGCT 11411 Query 211035 TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094 ||||| ||||| || ||||| || || ||||| | ||||| || || || || || Sbjct 11410 TTCACATTTTCAATTGTGTCCGAAGCCTCCACCTCTAAGGTGATTGTTTTGCCAGTAAGG 11351 Query 211095 GTCTTTACAAACACCTGCATTTT 211117 || |||||||| | |||||| || Sbjct 11350 GTTTTTACAAAAATCTGCATCTT 11328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158857462374680