Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq2430 102 2e-16 seq2130 102 2e-16 seq285 96.9 8e-15 >seq2430 Length=18656 Score = 102 bits (112), Expect = 2e-16 Identities = 111/145 (77%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || || || ||||| || || ||||||||||| || |||||||| || || || ||| Sbjct 6227 TTACCTGCAAAAATAAGACGCTGCTGGTCGGGCGGGATCCCTTCCTTATCCTGAAT-TTT 6285 Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| ||||| |||||||||||| || | ||| || || | |||||| || || ||||| Sbjct 6286 TGCTTTCACGTTTTCGATGGTGTCGGACGCTTCAACCTCAAGCGTGATGGTTTTACCCGT 6345 Query 225690 CAAAGTTTTTATGAACACTTGCATT 225714 | ||||| | ||| | ||||||| Sbjct 6346 AAGGGTTTTGACGAAAATTTGCATT 6370 Score = 91.5 bits (100), Expect = 4e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||| || ||||| || || ||||||||||| || || |||||||| ||||| ||| | Sbjct 4714 CCAGCAAAAATAAGACGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATTTTTGCC 4773 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 || ||| ||||| || ||||||| || || || || || || || || || |||| | Sbjct 4774 TTAACATTCTCGATAGTATCTGAGGCCTCAACTTCCAAAGTAATTGTTTTCCCTGTCAGA 4833 Query 225694 GTTTTTATGAACACTTGCAT 225713 || || | ||| | ||||| Sbjct 4834 GTCTTCACGAAAATCTGCAT 4853 >seq2130 Length=20510 Score = 102 bits (112), Expect = 2e-16 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 |||||| || ||||||||||| ||||| |||||||| || ||||| || || |||||||| Sbjct 11476 GAATATCTGTCCATCAGTAATTGAGATCACATTTGTTGGAATATATGCTGATACATCACC 11417 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCA 4575 ||||| ||||| | ||| || ||||| || || || || |||||| Sbjct 11416 AGCTTGCGTTTCAATAACTGGCAAGGCAGTAAGCGAGCCGCCACCA 11371 >seq285 Length=50150 Score = 96.9 bits (106), Expect = 8e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 || || || || | ||| || || ||||| |||||||| ||||| |||||||| ||| | Sbjct 46405 CCTGCAAAAATCAATCGCTGCTGATCGGGAGGAATACCCTCCTTATCTTGGATTTTTGCC 46346 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 ||||| || || ||||| || | ||| || || | || || ||||| || |||||| Sbjct 46345 TTCACGTTCTCTATAGTGTCCGAAGCTTCAACTTCAAGAGTAATGGTCTTACCAGTCAAA 46286 Query 225694 GTTTTTATGAACACTTGCATTTT 225716 ||||| | ||| | ||||||||| Sbjct 46285 GTTTTCACGAAAATTTGCATTTT 46263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192228180803408