Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq285 141 2e-28 seq2430 105 1e-17 >seq285 Length=50150 Score = 141 bits (156), Expect = 2e-28 Identities = 117/143 (82%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||| ||||| || || || || |||||||||||||| |||||||| ||||| Sbjct 46405 CCTGCAAAAATCAATCGCTGCTGATCGGGAGGAATACCCTCCTTATCTTGGATTTTTGCC 46346 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || ||| | || ||||||||||||||||| ||||| ||||| || |||||||| |||||| Sbjct 46345 TTCACGTTCTCTATAGTGTCCGAAGCTTCAACTTCAAGAGTAATGGTCTTACCAGTCAAA 46286 Query 283080 GTCTTAACGAATATCTGCATTTT 283102 || || ||||| || |||||||| Sbjct 46285 GTTTTCACGAAAATTTGCATTTT 46263 >seq2430 Length=18656 Score = 105 bits (116), Expect = 1e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || || || || ||||| ||||| || ||| || ||||| |||||||| ||||| Sbjct 5010 TTACCAGCGAAAATTAAACGCTGTTGATCCGGCGGTATTCCCTCTTTGTCTTGAATCTTC 5069 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 ||||| || | || || ||||||||||| || ||||| || || ||||| || || || Sbjct 5070 GCTTTCACATTTTCAATGGTGTCCGAAGCCTCAACTTCAAGCGTTATCGTTTTCCCAGTA 5129 Query 283077 AAAGTCTTAACGAATATCTGCAT 283099 | ||||||||||| || ||||| Sbjct 5130 AGGGTCTTAACGAAAATTTGCAT 5152 Score = 104 bits (114), Expect = 5e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||| || | ||| || ||||| ||| || ||||||||||| ||||| ||||| Sbjct 4714 CCAGCAAAAATAAGACGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATTTTTGCC 4773 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || || | |||||||| || || || || ||||| | ||| || || || || |||| | Sbjct 4774 TTAACATTCTCGATAGTATCTGAGGCCTCAACTTCCAAAGTAATTGTTTTCCCTGTCAGA 4833 Query 283080 GTCTTAACGAATATCTGCAT 283099 ||||| ||||| |||||||| Sbjct 4834 GTCTTCACGAAAATCTGCAT 4853 Score = 96.9 bits (106), Expect = 7e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || || || || ||||||||||| || ||||| || |||||||| || ||||| Sbjct 5325 TTACCAGCGAAAATTAAACGTTGTTGATCCGGAGGAATCCCTTCCTTGTCCTGAATCTTC 5384 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 ||||| || | || || || || || || || |||||||| || || || || || || Sbjct 5385 GCTTTAACATTCTCAATCGTATCAGACGCCTCAACTTCGAGCGTTATAGTTTTCCCGGTA 5444 Query 283077 AAAGTCTTAACGAATATCTGCAT 283099 | ||| |||||||| |||||||| Sbjct 5445 AGAGTTTTAACGAAAATCTGCAT 5467 Score = 91.5 bits (100), Expect = 3e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||| || | ||| ||||| || ||||| || ||||| || || || |||||| Sbjct 6685 CCTGCAAAAATAAGACGCTGTTGATCGGGTGGAATTCCTTCCTTATCCTGAATTTTTGCT 6744 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || || | || || ||||| |||||||||||||| | |||||| || || || || | | Sbjct 6745 TTCACATTCTCAATTGTGTCGGAAGCTTCGACTTCCAAAGTGATTGTTTTGCCAGTAAGA 6804 Query 283080 GTCTTAACGAATATCTGCAT 283099 || || || || || ||||| Sbjct 6805 GTTTTGACAAAGATTTGCAT 6824 Score = 87.8 bits (96), Expect = 4e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| ||||| || ||||| | ||| || |||||||||||||| |||| Sbjct 4854 ACCACCACGCAACCGAAGCACAAGATGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGA 4913 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 |||||| || |||||||| || || ||||| ||||| Sbjct 4914 AAGCGTTCGACCATCCTCGAGCTGCTTCCCTGCAAA 4949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046473226186128