Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2430 122 2e-22 seq2949 100 7e-16 >seq2430 Length=18656 Score = 122 bits (134), Expect = 2e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| || || || ||||| ||||| || ||||| ||| || ||| Sbjct 6366 CAAATTTTCGTCAAAACCCTTACGGGTAAAACCATCACGCTTGAGGTTGAAGCGTCCGAC 6307 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| ||| |||||||| || ||||| ||||| || |||||||| Sbjct 6306 ACCATCGAAAACGTGAAAGCAAAAATTCAGGATAAGGAAGGGATCCCGCCCGACCAGCAG 6247 Query 178044 CGACTTATCTTCGCCGGAAA 178063 || ||||| || || || || Sbjct 6246 CGTCTTATTTTTGCAGGTAA 6227 Score = 100 bits (110), Expect = 7e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| |||||||| || || ||||| || || ||||| || || || || Sbjct 5464 CAGATTTTCGTTAAAACTCTTACCGGGAAAACTATAACGCTCGAAGTTGAGGCGTCTGAT 5405 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| |||||||||||||| ||||| || |||||||| || ||| Sbjct 5404 ACGATTGAGAATGTTAAAGCGAAGATTCAGGACAAGGAAGGGATTCCTCCGGATCAACAA 5345 Query 178044 CGACTTATCTTCGCCGGAAA 178063 || | || ||||| || || Sbjct 5344 CGTTTAATTTTCGCTGGTAA 5325 Score = 98.7 bits (108), Expect = 2e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| ||||| ||||| ||||| || || | || || || |||||| Sbjct 4850 CAGATTTTCGTGAAGACTCTGACAGGGAAAACAATTACTTTGGAAGTTGAGGCCTCAGAT 4791 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| || || ||| || |||||||| || || ||||| || |||||||| Sbjct 4790 ACTATCGAGAATGTTAAGGCAAAAATCCAGGACAAGGAGGGGATCCCGCCCGACCAGCAG 4731 Query 178044 CGACTTATCTTCGCCGG 178060 || ||||| || || || Sbjct 4730 CGTCTTATTTTTGCTGG 4714 Score = 91.5 bits (100), Expect = 4e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || || || || |||||||| || || || || || || ||| Sbjct 5149 CAAATTTTCGTTAAGACCCTTACTGGGAAAACGATAACGCTTGAAGTTGAGGCTTCGGAC 5090 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| |||||||| |||||||| ||||| || ||||| || || Sbjct 5089 ACCATTGAAAATGTGAAAGCGAAGATTCAAGACAAAGAGGGAATACCGCCGGATCAACAG 5030 Query 178044 CGACTTATCTTCGCCGGAAA 178063 || | || ||||| || || Sbjct 5029 CGTTTAATTTTCGCTGGTAA 5010 Score = 91.5 bits (100), Expect = 4e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| |||||||| || || || ||||| || || || || || || || ||| Sbjct 5761 CAGATTTTTGTGAAAACGCTTACTGGCAAAACCATAACTCTTGAAGTTGAGGCGTCTGAC 5702 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| ||| ||||||||||||||||| || |||||||| || || Sbjct 5701 ACGATTGAAAATGTCAAAGCAAAAATTCAGGACAAAGAAGGGATTCCTCCGGATCAACAG 5642 Query 178044 CGACTTATCTTCGCCGGAAA 178063 || | || || || || || Sbjct 5641 CGTTTGATTTTTGCTGGTAA 5622 Score = 86.0 bits (94), Expect = 2e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || |||||||| || || || || || || |||||| Sbjct 6058 CAGATCTTTGTTAAGACCCTTACTGGAAAAACAATTACTCTTGAAGTAGAGGCTTCAGAC 5999 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| |||||| || || ||||||||||| ||||| ||||| || || ||| Sbjct 5998 ACAATTGAGAATGTCAAAGCCAAAATCCAGGACAAAGAGGGAATTCCTCCAGATCAACAA 5939 Query 178044 CGACTTATCTTCGCCGGAAA 178063 ||| | || || || || || Sbjct 5938 CGATTAATTTTTGCTGGTAA 5919 >seq2949 Length=15852 Score = 100 bits (110), Expect = 7e-16 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 177916 AAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAA 177975 ||| | | || ||||| || ||||| || || || ||||| |||||| | |||||||| Sbjct 11326 AAAAGATGCAGATTTTTGTAAAAACCCTTACTGGCAAAACAATCACCTTAGAGGTGGAGG 11385 Query 177976 GCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGG 178035 || ||||| || || || || ||| |||||||||||||| ||||| |||||||||| Sbjct 11386 CTTCGGACACAATTGAAAATGTGAAAGCGAAGATTCAGGACAAGGAAGGCATCCCTCCGG 11445 Query 178036 ACCAGCAACG 178045 | ||||| || Sbjct 11446 ATCAGCAGCG 11455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203425334911408