Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq62 91.5 1e-13 seq9 91.5 1e-13 >seq62 Length=411361 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 ||||| ||| | || |||||||| |||||||| || |||||| | || ||||||| Sbjct 311393 GATCAGCAACGGCTGATCTTTGCCGGCAAACAGCTCGAAGATGGCCGCACGTTGGCCGAC 311334 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGT 29170 ||||| ||||||||||| |||||||||||| |||| Sbjct 311333 TACAACATTCAGAAGGAGTCTACTCTTCACTTGGT 311299 >seq9 Length=1094565 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 ||||| ||| | || |||||||| |||||||| || |||||| | || ||||||| Sbjct 204484 GATCAGCAACGGCTGATCTTTGCCGGCAAACAGCTCGAAGATGGCCGCACGTTGGCCGAC 204425 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGT 29170 ||||| ||||||||||| |||||||||||| |||| Sbjct 204424 TACAACATTCAGAAGGAGTCTACTCTTCACTTGGT 204390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428324275105130