Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq62 86.0 5e-12 seq9 86.0 5e-12 >seq62 Length=411361 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| || | ||| |||||||| |||||||| ||||| |||| || || | || Sbjct 311296 AGGACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGCCAACGTGCGGCCATCT 311355 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||||||||| ||| | || || | ||||| || || | ||| |||||||| Sbjct 311356 TCGAGCTGTTTGCCGGCAAAGATCAGCCGTTGCTGATCAGGCGGGATGCCCTCCTTGTCC 311415 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||||| | | | || || || |||| |||| || || || Sbjct 311416 TGGATCTTCGTCTTCACGTTGTCAACTGTGTCCGAACTCTCCACGTCCAAAGTGATCGTT 311475 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| | || || || || |||||||| Sbjct 311476 TTGCCGGTCAGTGTCTTCACGAAAATTTGCAT 311507 >seq9 Length=1094565 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| || | ||| |||||||| |||||||| ||||| |||| || || | || Sbjct 204387 AGGACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGCCAACGTGCGGCCATCT 204446 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||||||||| ||| | || || | ||||| || || | ||| |||||||| Sbjct 204447 TCGAGCTGTTTGCCGGCAAAGATCAGCCGTTGCTGATCAGGCGGGATGCCCTCCTTGTCC 204506 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||||| | | | || || || |||| |||| || || || Sbjct 204507 TGGATCTTCGTCTTCACGTTGTCAACTGTGTCCGAACTCTCCACGTCCAAAGTGATCGTT 204566 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| | || || || || |||||||| Sbjct 204567 TTGCCGGTCAGTGTCTTCACGAAAATTTGCAT 204598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422247641446136