Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq62 82.4 6e-11 seq9 82.4 6e-11 >seq62 Length=411361 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208 ||||| ||| | || |||||||| |||||||| | |||||| | || ||||||| Sbjct 311393 GATCAGCAACGGCTGATCTTTGCCGGCAAACAGCTCGAAGATGGCCGCACGTTGGCCGAC 311334 Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGT 25243 ||||| ||||| ||||| |||||||||||| |||| Sbjct 311333 TACAACATTCAGAAGGAGTCTACTCTTCACTTGGT 311299 >seq9 Length=1094565 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208 ||||| ||| | || |||||||| |||||||| | |||||| | || ||||||| Sbjct 204484 GATCAGCAACGGCTGATCTTTGCCGGCAAACAGCTCGAAGATGGCCGCACGTTGGCCGAC 204425 Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGT 25243 ||||| ||||| ||||| |||||||||||| |||| Sbjct 204424 TACAACATTCAGAAGGAGTCTACTCTTCACTTGGT 204390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410785555207844