Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq38 82.4 8e-11 >seq38 Length=464492 Score = 82.4 bits (90), Expect = 8e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 21529 TGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGA 21588 ||||| || |||| | ||| | ||||||| ||| || |||| ||||| |||||| Sbjct 130669 TGTTAGGCCAGGCAGAAGTCCACGTTTTTTTAGCCAGAAAATTGCGGCAAAACTTCCTGA 130728 Query 21589 AAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCA 21631 ||||||||||||||||| |||||||| ||||| | || |||| Sbjct 130729 GAAGAAAATGCCCTCAACTGCAGCAAACGCAACGAGTCTTTCA 130771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531885866885040