Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_007021.1 Length=130706 Score E Sequences producing significant alignments: (Bits) Value seq390 89.7 4e-13 >seq390 Length=58657 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 106536 CCACCTGCAATTATTAGGTTTGTAATCATCATCATTATCAATTCTATCTAGTGTTAAAGT 106595 ||| |||||||| | ||| | ||||| | |||||| | | ||||||| |||||| | Sbjct 47569 CCATCTGCAATTTTCAGGCTCGTAATTTTTATCATTCTGTTTCCTATCTAAAGTTAAATT 47628 Query 106596 GTTATCATATCCACTATTCATTGACCATTTATAAAAATTTTCAAAAGAATCAAACCATTC 106655 | | || ||| | | | |||||||| | ||| | | |||| | || |||||| Sbjct 47629 AGCAGCGTAACCATTTTCTAAAGACCATTTTTCAAATTCATAAAAACTGTTAACCCATTC 47688 Query 106656 ATCACAAACTTTTATACCTCTCTCACCATAGTTTTTA 106692 ||||||||||||||||||| | ||||| || |||||| Sbjct 47689 ATCACAAACTTTTATACCTTTTTCACCGTAATTTTTA 47725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418122954354802