Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq127 107 5e-18 >seq127 Length=223113 Score = 107 bits (118), Expect = 5e-18 Identities = 120/160 (75%), Gaps = 3/160 (2%) Strand=Plus/Minus Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTCATTCGCGGAACGTCTT 22497 || || ||||||||||| || ||||| | ||| | |||| || | ||| | ||| Sbjct 209274 AAAAAAGCAGATTGGGCTTTGCGTTGGATTAGCAAGG---GTTCCTTTGTAGAAAGGCTT 209218 Query 22498 ATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGG 22557 ||||| ||||||| ||| || ||||| || |||||||| |||||||| ||||||||| Sbjct 209217 ATTGCTTTTGCTGCGGTAGAGGGCATCTTTTTTTCTGGTAGTTTTTGTGCCATCTTTTGG 209158 Query 22558 CTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAA 22597 || |||||||| | | ||||| || |||| ||||||| Sbjct 209157 CTTAAAAAACGAGGCCTAATGCCAGGGTTAACCTTTTCAA 209118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303316093556372