Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq62 84.2 2e-11 seq9 84.2 2e-11 >seq62 Length=411361 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| || || || || || || ||||| || || | || |||| Sbjct 311507 ATGCAAATTTTCGTGAAGACACTGACCGGCAAAACGATCACTTTGGACGTGGAGAGTTCG 311448 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| ||||| || || || || || || || ||| |||| |||||| Sbjct 311447 GACACAGTT-GACAACGTGAAGACGAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCA 311389 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | || || | ||| |||||||| | ||||||| | || ||||||| || || Sbjct 311388 GCAACGGCTGATCTTTGCCGGCAAACAGCTCGAAGATGGCCGCACGTTGGCCGACTACAA 311329 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 |||||| || ||||||||| | || |||| Sbjct 311328 CATTCAGAAGGAGTCTACTCTTCACTTGGT 311299 >seq9 Length=1094565 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| || || || || || || ||||| || || | || |||| Sbjct 204598 ATGCAAATTTTCGTGAAGACACTGACCGGCAAAACGATCACTTTGGACGTGGAGAGTTCG 204539 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| ||||| || || || || || || || ||| |||| |||||| Sbjct 204538 GACACAGTT-GACAACGTGAAGACGAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCA 204480 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | || || | ||| |||||||| | ||||||| | || ||||||| || || Sbjct 204479 GCAACGGCTGATCTTTGCCGGCAAACAGCTCGAAGATGGCCGCACGTTGGCCGACTACAA 204420 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 |||||| || ||||||||| | || |||| Sbjct 204419 CATTCAGAAGGAGTCTACTCTTCACTTGGT 204390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425332357005520