Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4 113 5e-20 >seq4 Length=1352950 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 114466 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 114525 ||| || || || |||| || ||||||| |||||||||| | || || || || Sbjct 596804 AAGCGCAATGGAGGCCAAGTTGCACACAGCGGTCTCATCCGGTGACGAATATTCAATGAT 596863 Query 114526 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 114585 ||| || ||||||||||| | || |||||||||||||| | ||||||||||| || Sbjct 596864 TTCGGTGCACAAATTTGAGCATTTTATGGTGCCCAAGTTTTGCTGATTTGACTTCCGATT 596923 Query 114586 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 114645 ||||| ||||| | | |||||| ||||| || |||||||| || || ||| || Sbjct 596924 GCACGCGTCCTTAAACAACATGTACGGCGTGCCGGTCTCCGTCTGCGAACTGATGATGCT 596983 Query 114646 CTTCCAGACATC 114657 |||||| || || Sbjct 596984 CTTCCACACTTC 596995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597336829297680