Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq4 104 4e-17 >seq4 Length=1352950 Score = 104 bits (114), Expect = 4e-17 Identities = 124/166 (75%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 203922 CGTACATGTGCATGGAAGACAGTTT-GCTCACGTTGGGGTCGGCCATGTGAATGTTCAGA 203980 |||| | ||||||||| |||||| || | || || | || |||||||||||||| Sbjct 675604 CGTAGAAGTGCATGGAGCTCAGTTTTGCATAA-TTCGGCTGCGCAATGTGAATGTTCAGC 675546 Query 203981 GACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGC 204040 || ||||||||||||||||| | || || || || ||||| | | ||| ||| ||| Sbjct 675545 GATTGGCTTTGGTCGATGAACGCGGCACGGTCGGCAGCCATTTCCAGAATATCCTTTTGC 675486 Query 204041 GAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGAGGCA 204086 | ||| |||||||||||| || ||| ||| || |||| || |||| Sbjct 675485 GGAATTTCCCACACCGTCCTGTACAGGTCCTTGATGTGCTGCGGCA 675440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795132876017760