Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq33 87.8 1e-11 >seq33 Length=573356 Score = 87.8 bits (96), Expect = 1e-11 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 474782 GCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCA 474841 || || ||||||||||||| |||| | || || ||||| | ||| | || ||||||||| Sbjct 296899 GCTACCAAAGATGCGGGAAAAATTTCTGGACTGAATGTGCTTCGTGTGATCAATGAACCA 296958 Query 474842 ACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAATTCTGACAAAG 474887 || ||||| || | |||||||||||||||||| | ||||||| Sbjct 296959 ACTGCAGCTGCCTTGGCTTATGGTCTTGATAAGGCTGAAGACAAAG 297004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268082858162408