Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_021775.1 Length=42215 Score E Sequences producing significant alignments: (Bits) Value seq390 102 2e-17 >seq390 Length=58657 Score = 102 bits (112), Expect = 2e-17 Identities = 127/173 (73%), Gaps = 1/173 (1%) Strand=Plus/Minus Query 15949 ATCCAGACCACTACACCCAAGGTGGCGTTGAGTGCATCGACGCTATCACGGCAGCTACTG 16008 |||||||||| || | |||||| ||||||||||||| || | || ||||| | Sbjct 35096 ATCCAGACCATTATAAGCAAGGTAAAATTGAGTGCATCGATGCATTAGAAGCTGCTACAG 35037 Query 16009 TAAATAAGACCGGTATCGAAGCCGTCTGTGTGGCGAACGTCATCAAGTACCTGTGGCGCT 16068 | || || || ||||| |||||||| ||| ||| || || || || ||||| ||||| | Sbjct 35036 TCAACAAAACAGGTATAGAAGCCGTATGTACGGCTAATGTAATTAAATACCTCTGGCGGT 34977 Query 16069 ACGAACTGAAGAACGGAGAGGAAGACGTCAGGAAGGCGCAGTGGTA-CTTGAA 16120 | || |||||| ||| ||||| || | ||| || |||||||| |||||| Sbjct 34976 ATGAGGGGAAGAATGGAATTGAAGATGTGAAGAAAGCTCAGTGGTATCTTGAA 34924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134962800277404