Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_021795.1 Length=38776 Score E Sequences producing significant alignments: (Bits) Value seq390 82.4 2e-11 >seq390 Length=58657 Score = 82.4 bits (90), Expect = 2e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 16264 AACCAAAGTTACATGATCTATTGATAAACATTCCTCCAGGGACAACCAAATCAACCATTT 16323 ||||||| | || || ||||||| |||||||| ||||| || | ||||| ||||||| Sbjct 430 AACCAAAACTGCACGACATATTGATCAACATTCCGCCAGGTTCATCTAAATCCACCATTT 489 Query 16324 GTACTGTCATGCTGCCTGCATGGGTTTGGATCATTGACCC 16363 |||| || ||| ||||||| |||| |||| | | ||||| Sbjct 490 GTACAGTAATGATGCCTGCCTGGGCATGGACCGTCGACCC 529 Score = 82.4 bits (90), Expect = 2e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 16264 AACCAAAGTTACATGATCTATTGATAAACATTCCTCCAGGGACAACCAAATCAACCATTT 16323 ||||||| | || || ||||||| |||||||| ||||| || | ||||| ||||||| Sbjct 55922 AACCAAAACTGCACGACATATTGATCAACATTCCGCCAGGTTCATCTAAATCCACCATTT 55981 Query 16324 GTACTGTCATGCTGCCTGCATGGGTTTGGATCATTGACCC 16363 |||| || ||| ||||||| |||| |||| | | ||||| Sbjct 55982 GTACAGTAATGATGCCTGCCTGGGCATGGACCGTCGACCC 56021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123958293789176