Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq32 102 6e-17 >seq32 Length=600051 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| |||| | ||||||| || ||||||| | | || ||||||||||| || || || Sbjct 414342 TCCGCCCCGGAGGCGCAGCAGCAGATGAAGCATTGCGTCCTTTTGAATGTTGTAGTCAGC 414401 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | |||| | ||||||||| |||||||| ||| | |||| || |||||| | | || Sbjct 414402 CAAAGTGCCATCATCATCGAGCTGTTTGCCCGCAAAGATCAGTCGTTGCTGTTTAGTTGG 414461 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || || | || | ||| ||||| ||| | | | ||||| || | || Sbjct 414462 GATGCCTTCCATGGCCTGGACTTTCTGTTTCACATTGTTGATGGTGTCCGAGCTGTGCAC 414521 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || | ||| || || || ||||| ||||| || |||||| Sbjct 414522 CTCCAGCGTCATGGCTTTTCCCGTCAAAGTTTTCACAAAAATTTGCATT 414570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385208655346686