Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_023582.1 Length=92417 Score E Sequences producing significant alignments: (Bits) Value seq390 82.4 5e-11 >seq390 Length=58657 Score = 82.4 bits (90), Expect = 5e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 76054 AACCCATCTACAATTCTCCGGATTATAATTTCCATCATTATTTATCCTGTCTATAGTCAA 76113 || |||||| ||||| || || | |||||| |||||| | | |||| |||| ||| || Sbjct 47566 AATCCATCTGCAATTTTCAGGCTCGTAATTTTTATCATTCTGTTTCCTATCTAAAGTTAA 47625 Query 76114 ATTAGGATTATACCCGTTTTCTAAAGACCAATTATAAAAAGATTCAAAGGAGTTTCTCCA 76173 ||||| | || || |||||||||||||| || | ||| | ||| ||| ||| Sbjct 47626 ATTAGCAGCGTAACCATTTTCTAAAGACCATTTTTCAAATTCATAAAAACTGTTAACCCA 47685 Query 76174 AGCATCGCAAACTTTAATCCCTCTTCCTCCATAGTTATTA 76213 |||| |||||||| || ||| || | || || || ||| Sbjct 47686 TTCATCACAAACTTTTATACCTTTTTCACCGTAATTTTTA 47725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295601508241468