Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_025439.1 Length=34773 Score E Sequences producing significant alignments: (Bits) Value seq390 87.8 4e-13 >seq390 Length=58657 Score = 87.8 bits (96), Expect = 4e-13 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24470 ACAAACATATACTCAAACTGCTGCTCATACCTATTATGGGTCAAAGGCATGGGGTTTGTT 24529 ||||||||||| ||||||| ||||||||| |||||||| || ||| || ||| | Sbjct 40418 ACAAACATATATTCAAACTCCTGCTCATATCTATTATGCGTTTGAGGGATAAAATTTTTC 40359 Query 24530 TTTGCGTACACCATCGTGTCATGCAATCTAAACCCGCATTCCATAGCCCATAATGCTTGC 24589 || ||||| | ||| || || || | | |||| || | |||| |||| || ||| Sbjct 40358 TTAGCGTATATCATAGTATCGTGTAGTTTAAAACCTAACGACATAAAATATAAAGCCTGC 40299 Query 24590 TTAAAACTCGTTCCCGTTTCGCTCCCCTTGATTGTCGCGTCGGCAACCACCCATACGACC 24649 ||||||| || || |||||| || || | || || | || |||||||| ||| Sbjct 40298 CTAAAACTGGTACCTGTTTCGGAACCGTTTTTAGTTTGATCACCTACAACCCATACAACC 40239 Query 24650 ACGCCGCCATCATCGGTTACTCG 24672 || || || || || || | ||| Sbjct 40238 ACTCCACCTTCCTCAGTAATTCG 40216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111149035437220